RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 HMGN2P05204 90 aaKnown RBP13.55□□□□□ -0.24
COL4A6-206ENST00000477085 TFPTP0C1Z6 253 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 ATXN8OSP0DMR3 200 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 RNH1P13489 461 aaKnown RBP13.55□□□□□ -0.24
COL4A6-206ENST00000477085 ALAS2P22557 587 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 PRIM2P49643 509 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 CDK6Q00534 326 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 SCARB2Q14108 478 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 MYBPC3Q14896 1274 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 LRRC23Q53EV4 343 aaPredicted RBP13.55□□□□□ -0.24
COL4A6-206ENST00000477085 TRMT12Q53H54 448 aaKnown RBP13.55□□□□□ -0.24
COL4A6-206ENST00000477085 FHL5Q5TD97 284 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 FAM111BQ6SJ93 734 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 SUMF1Q8NBK3 374 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 OR51Q1Q8NH59 317 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 SFXN5Q8TD22 340 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 SLC38A5Q8WUX1 472 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 PYURFQ96I23 114 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 OR51I1Q9H343 314 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 SYNDIG1Q9H7V2 258 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 NTMQ9P121 344 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 KCNE3Q9Y6H6 103 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 PLOD2O00469 737 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 EMC8O43402 210 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 FHP07954 510 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 CT62P0C5K7 136 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 OR12D1P0DN82 309 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 MATN1P21941 496 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 AVPR1BP47901 424 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 MAN2A2P49641 1150 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 ITGA1P56199 1179 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 PCBP3P57721 371 aaKnown RBP13.55□□□□□ -0.24
COL4A6-206ENST00000477085 RBBP4Q09028 425 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 LASP1Q14847 261 aaKnown RBP13.55□□□□□ -0.24
COL4A6-206ENST00000477085 FAM214AQ32MH5 1076 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 SFT2D3Q587I9 215 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 CBLL1Q75N03 491 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 CCDC80Q76M96 950 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 SZRD1Q7Z422 152 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 VTCN1Q7Z7D3 282 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 B3GNT8Q7Z7M8 397 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 SLITRK4Q8IW52 837 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 NUP43Q8NFH3 380 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 CNDP2Q96KP4 475 aaKnown RBP13.55□□□□□ -0.24
COL4A6-206ENST00000477085 RAD21L1Q9H4I0 556 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 A4GALTQ9NPC4 353 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 SERTAD3Q9UJW9 196 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 LRRC42Q9Y546 428 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 PCDHGB2Q9Y5G2 931 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 AK5Q9Y6K8 562 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 WDFY3Q8IZQ1 3526 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 SCN2AQ99250 2005 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 TNFRSF10AO00220 468 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 TIAF1O95411 115 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 LDOC1O95751 146 aaPredicted RBP13.54□□□□□ -0.24
COL4A6-206ENST00000477085 SEMG1P04279 462 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 RAP2AP10114 183 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 CD59P13987 128 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 CKMT2P17540 419 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 GRK6P43250 576 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 EFNA3P52797 238 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 ZNF630Q2M218 657 aaPredicted RBP13.54□□□□□ -0.24
COL4A6-206ENST00000477085 PRICKLE4Q2TBC4 344 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 LAIR1Q6GTX8 287 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 TLDC1Q6P9B6 456 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 OLIG3Q7RTU3 272 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 WDR53Q7Z5U6 358 aaPredicted RBP13.54□□□□□ -0.24
COL4A6-206ENST00000477085 SAMD14Q8IZD0 417 aaPredicted RBP13.54□□□□□ -0.24
COL4A6-206ENST00000477085 OR2L13Q8N349 312 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 SLC38A9Q8NBW4 561 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 MIPOL1Q8TD10 442 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 TAMM41Q96BW9 452 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 SLC47A1Q96FL8 570 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 SLC35G5Q96KT7 338 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 EFHD1Q9BUP0 239 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 UGT2B28Q9BY64 529 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 NTN4Q9HB63 628 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 SIDT1Q9NXL6 827 aaKnown RBP13.54□□□□□ -0.24
COL4A6-206ENST00000477085 RAB23Q9ULC3 237 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 HCN4Q9Y3Q4 1203 aa13.54□□□□□ -0.24
COL4A6-206ENST00000477085 PRR33A8MZF0 331 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 M0QX08 132 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 GDF9O60383 454 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 CTNSO60931 367 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 ZNF682O95780 498 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 OPN1SWP03999 348 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 MAOAP21397 527 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 PPP2R1BP30154 601 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 XCR1P46094 333 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 DUSP3P51452 185 aaPredicted RBP13.53□□□□□ -0.24
COL4A6-206ENST00000477085 FUT5Q11128 374 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 SYPL1Q16563 259 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 FAM98BQ52LJ0 330 aaKnown RBP13.53□□□□□ -0.24
COL4A6-206ENST00000477085 RPS26P11Q5JNZ5 115 aaPredicted RBP13.53□□□□□ -0.24
COL4A6-206ENST00000477085 C1orf189Q5VU69 101 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 NIPAL1Q6NVV3 410 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 EIF3MQ7L2H7 374 aaKnown RBP13.53□□□□□ -0.24
COL4A6-206ENST00000477085 TMEM126BQ8IUX1 230 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 EID3Q8N140 333 aa13.53□□□□□ -0.24
COL4A6-206ENST00000477085 ANKFN1Q8N957 763 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms