RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 CTBP2P56545 445 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 RBBP4Q09028 425 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 ARHGAP15Q53QZ3 475 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 NOTUMQ6P988 496 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 QSOX2Q6ZRP7 698 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 USP30Q70CQ3 517 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 SFT2D1Q8WV19 159 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 MTFMTQ96DP5 389 aaKnown RBP10.05□□□□□ -0.8
ABCF1-205ENST00000475993 CMTM3Q96MX0 182 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 OR2M2Q96R28 347 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 DPYSL5Q9BPU6 564 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 POLR1EQ9GZS1 481 aaKnown RBP10.05□□□□□ -0.8
ABCF1-205ENST00000475993 OR51J1Q9H342 316 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 TPT1P8Q9HAU6 139 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 PRMT8Q9NR22 394 aaPredicted RBP10.05□□□□□ -0.8
ABCF1-205ENST00000475993 THSD1Q9NS62 852 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 ACER3Q9NUN7 267 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 DNAJC27Q9NZQ0 273 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 ASH2LQ9UBL3 628 aa10.05□□□□□ -0.8
ABCF1-205ENST00000475993 RPL36Q9Y3U8 105 aaKnown RBP10.05□□□□□ -0.8
ABCF1-205ENST00000475993 IQCF5A8MTL0 148 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 TLR4O00206 839 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 MMP20O60882 483 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 LY86O95711 162 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 MOCS2O96007 188 aaPredicted RBP10.04□□□□□ -0.8
ABCF1-205ENST00000475993 PDYNP01213 254 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 MMP10P09238 476 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 DNASE1P24855 282 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 PBX3P40426 434 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 FNTBP49356 437 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 RPS25P62851 125 aaKnown RBP10.04□□□□□ -0.8
ABCF1-205ENST00000475993 RNF4P78317 190 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 IL10RBQ08334 325 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 TRAM2Q15035 370 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 IFI44LQ53G44 452 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 C2CD4CQ8TF44 421 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 GTF3AQ92664 365 aaKnown RBP10.04□□□□□ -0.8
ABCF1-205ENST00000475993 MAL2Q969L2 176 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 DPH7Q9BTV6 452 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 TRIM62Q9BVG3 475 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 RERGLQ9H628 205 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 BRD9Q9H8M2 597 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 UFSP2Q9NUQ7 469 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 AFF4Q9UHB7 1163 aaKnown RBP10.04□□□□□ -0.8
ABCF1-205ENST00000475993 FBXL2Q9UKC9 423 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 FZD4Q9ULV1 537 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 DHRS7Q9Y394 339 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 PCDHB11Q9Y5F2 797 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 MEIKINA0A087WXM9 373 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 ARRDC5A6NEK1 342 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 POM121BA6NF01 834 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 MOXD2PA6NHM9 499 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 M0R233 179 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 ADAMTS4O75173 837 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 LGALS2P05162 132 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 URODP06132 367 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 RAB3BP20337 219 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 PRPH2P23942 346 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 S100PP25815 95 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 FGF9P31371 208 aaPredicted RBP10.04□□□□□ -0.8
ABCF1-205ENST00000475993 OR1E2P47887 323 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 AVPR1BP47901 424 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 FOXK2Q01167 660 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 SPIN4Q56A73 249 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 PABPC1L2AQ5JQF8 200 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 RGS7BPQ6MZT1 257 aaPredicted RBP10.04□□□□□ -0.8
ABCF1-205ENST00000475993 SLC27A4Q6P1M0 643 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 TMEM91Q6ZNR0 172 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 PAQR7Q86WK9 346 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 ZNF683Q8IZ20 524 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 AQP11Q8NBQ7 271 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 C10orf90Q96M02 699 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 COQ10AQ96MF6 247 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 PRDM5Q9NQX1 630 aaPredicted RBP10.04□□□□□ -0.8
ABCF1-205ENST00000475993 DLL4Q9NR61 685 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 OARD1Q9Y530 152 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 DOCK4Q8N1I0 1966 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 J3KTA2 159 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 CASC3O15234 703 aaKnown RBP10.04□□□□□ -0.8
ABCF1-205ENST00000475993 GASTP01350 101 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 CD53P19397 219 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 ITGB8P26012 769 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 CTNNB1P35222 781 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 GPX4P36969 197 aaPredicted RBP10.04□□□□□ -0.8
ABCF1-205ENST00000475993 KCNJ3P48549 501 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 PGDP52209 483 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 RIDAP52758 137 aaKnown RBP10.04□□□□□ -0.8
ABCF1-205ENST00000475993 DEFA5Q01523 94 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 SRSF11Q05519 484 aaKnown RBP10.04□□□□□ -0.8
ABCF1-205ENST00000475993 CRYZQ08257 329 aaKnown RBP10.04□□□□□ -0.8
ABCF1-205ENST00000475993 TAF1AQ15573 450 aaPredicted RBP10.04□□□□□ -0.8
ABCF1-205ENST00000475993 CCDC85BQ15834 202 aaPredicted RBP10.04□□□□□ -0.8
ABCF1-205ENST00000475993 UGT8Q16880 541 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 CRTC2Q53ET0 693 aaPredicted RBP10.04□□□□□ -0.8
ABCF1-205ENST00000475993 MPPE1Q53F39 396 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 RBMS3Q6XE24 437 aaKnown RBP10.04□□□□□ -0.8
ABCF1-205ENST00000475993 LBX2Q6XYB7 198 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 MOB2Q70IA6 237 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 LAPTM4BQ86VI4 370 aa10.04□□□□□ -0.8
ABCF1-205ENST00000475993 FBXO16Q8IX29 292 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms