RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 B3GNTL1Q67FW5 361 aaPredicted RBP14.06□□□□□ -0.16
SNX13-205ENST00000471744 OGFOD2Q6N063 350 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 RNF111Q6ZNA4 994 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 RGS9BPQ6ZS82 235 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 WDR75Q8IWA0 830 aaKnown RBP14.06□□□□□ -0.16
SNX13-205ENST00000471744 LIX1Q8N485 282 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 NATD1Q8N6N6 113 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 OR7G1Q8NGA0 311 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 NUBPLQ8TB37 319 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 ZNF675Q8TD23 568 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 PNPLA2Q96AD5 504 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 EGLN2Q96KS0 407 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 PPP1R36Q96LQ0 422 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 BBS4Q96RK4 519 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 C1orf50Q9BV19 199 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 CDCP1Q9H5V8 836 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 MARCOQ9UEW3 520 aaPredicted RBP14.06□□□□□ -0.16
SNX13-205ENST00000471744 GIMAP2Q9UG22 337 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 ZNF223Q9UK11 482 aaPredicted RBP14.06□□□□□ -0.16
SNX13-205ENST00000471744 ERVK-19Q9WJR5 959 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 CFL2Q9Y281 166 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 HEMK1Q9Y5R4 338 aaPredicted RBP14.06□□□□□ -0.16
SNX13-205ENST00000471744 NUP214P35658 2090 aaPredicted RBP14.06□□□□□ -0.16
SNX13-205ENST00000471744 BCAS2O75934 225 aaPredicted RBP14.05□□□□□ -0.16
SNX13-205ENST00000471744 TGDSO95455 350 aa14.05□□□□□ -0.16
SNX13-205ENST00000471744 RNF4P78317 190 aa14.05□□□□□ -0.16
SNX13-205ENST00000471744 PDE7AQ13946 482 aa14.05□□□□□ -0.16
SNX13-205ENST00000471744 TLR1Q15399 786 aa14.05□□□□□ -0.16
SNX13-205ENST00000471744 PRICKLE4Q2TBC4 344 aa14.05□□□□□ -0.16
SNX13-205ENST00000471744 DGAT2L6Q6ZPD8 337 aa14.05□□□□□ -0.16
SNX13-205ENST00000471744 SLC29A4Q7RTT9 530 aa14.05□□□□□ -0.16
SNX13-205ENST00000471744 VWA5B2Q8N398 1253 aa14.05□□□□□ -0.16
SNX13-205ENST00000471744 HORMAD2Q8N7B1 307 aa14.05□□□□□ -0.16
SNX13-205ENST00000471744 RBMXL3Q8N7X1 1067 aaKnown RBP14.05□□□□□ -0.16
SNX13-205ENST00000471744 ZFP28Q8NHY6 868 aa14.05□□□□□ -0.16
SNX13-205ENST00000471744 PPCDCQ96CD2 204 aa14.05□□□□□ -0.16
SNX13-205ENST00000471744 PRPF18Q99633 342 aaKnown RBP14.05□□□□□ -0.16
SNX13-205ENST00000471744 BRINP2Q9C0B6 783 aa14.05□□□□□ -0.16
SNX13-205ENST00000471744 BAIAP2L1Q9UHR4 511 aa14.05□□□□□ -0.16
SNX13-205ENST00000471744 B3GNT3Q9Y2A9 372 aa14.05□□□□□ -0.16
SNX13-205ENST00000471744 YARS2Q9Y2Z4 477 aaKnown RBP14.05□□□□□ -0.16
SNX13-205ENST00000471744 TRAV17A0A0B4J275 112 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 A0A1W2PS29 197 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 OR5H15A6NDH6 313 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 GABRR3A8MPY1 467 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 MYO1GB0I1T2 1018 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 SDHDO14521 159 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 PDPK1O15530 556 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 WDPCPO95876 746 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 IFI6P09912 130 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 PRPS1L1P21108 318 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 SLC37A1P57057 533 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 C21orf58P58505 322 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 C19orf57Q0VDD7 668 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 ZNF750Q32MQ0 723 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 FCRLBQ6BAA4 426 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 Q6ZS92 163 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 LARP4Q71RC2 724 aaKnown RBP eCLIP14.04□□□□□ -0.16
SNX13-205ENST00000471744 SPATA19Q7Z5L4 167 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 PTRH1Q86Y79 214 aaKnown RBP14.04□□□□□ -0.16
SNX13-205ENST00000471744 CCDC116Q8IYX3 515 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 BEST3Q8N1M1 668 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 ZNF843Q8N446 348 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 SUN3Q8TAQ9 357 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 GFM2Q969S9 779 aaKnown RBP14.04□□□□□ -0.16
SNX13-205ENST00000471744 CTHRC1Q96CG8 243 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 ZBED6CLQ96FA7 236 aaPredicted RBP14.04□□□□□ -0.16
SNX13-205ENST00000471744 MAELQ96JY0 434 aaKnown RBP14.04□□□□□ -0.16
SNX13-205ENST00000471744 UTP23Q9BRU9 249 aaKnown RBP14.04□□□□□ -0.16
SNX13-205ENST00000471744 ZBTB20Q9HC78 741 aaPredicted RBP14.04□□□□□ -0.16
SNX13-205ENST00000471744 ATAD3AQ9NVI7 634 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 MAT2BQ9NZL9 334 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 SH3BP4Q9P0V3 963 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 MYOTQ9UBF9 498 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 ATP6V1HQ9UI12 483 aa14.04□□□□□ -0.16
SNX13-205ENST00000471744 RALYQ9UKM9 306 aaKnown RBP14.04□□□□□ -0.16
SNX13-205ENST00000471744 EXO1Q9UQ84 846 aaKnown RBP14.04□□□□□ -0.16
SNX13-205ENST00000471744 RP1L1Q8IWN7 2480 aaPredicted RBP14.04□□□□□ -0.16
SNX13-205ENST00000471744 B8ZZF3 427 aa14.03□□□□□ -0.16
SNX13-205ENST00000471744 SCAMP2O15127 329 aaKnown RBP14.03□□□□□ -0.16
SNX13-205ENST00000471744 AKAP10O43572 662 aa14.03□□□□□ -0.16
SNX13-205ENST00000471744 ITGA10O75578 1167 aa14.03□□□□□ -0.16
SNX13-205ENST00000471744 LRATO95237 230 aa14.03□□□□□ -0.16
SNX13-205ENST00000471744 G6PDP11413 515 aa14.03□□□□□ -0.16
SNX13-205ENST00000471744 TRHRP34981 398 aaPredicted RBP14.03□□□□□ -0.16
SNX13-205ENST00000471744 SSR4P51571 173 aa14.03□□□□□ -0.16
SNX13-205ENST00000471744 NCBP2P52298 156 aaKnown RBP eCLIP14.03□□□□□ -0.16
SNX13-205ENST00000471744 CLDN8P56748 225 aa14.03□□□□□ -0.16
SNX13-205ENST00000471744 MPEG1Q2M385 716 aa14.03□□□□□ -0.16
SNX13-205ENST00000471744 HLA-DQA1Q5Y7H0 255 aa14.03□□□□□ -0.16
SNX13-205ENST00000471744 SLC6A19Q695T7 634 aa14.03□□□□□ -0.16
SNX13-205ENST00000471744 GPALPP1Q8IXQ4 340 aa14.03□□□□□ -0.16
SNX13-205ENST00000471744 SLC15A4Q8N697 577 aa14.03□□□□□ -0.16
SNX13-205ENST00000471744 AMER2Q8N7J2 671 aa14.03□□□□□ -0.16
SNX13-205ENST00000471744 ZNF321PQ8N8H1 164 aa14.03□□□□□ -0.16
SNX13-205ENST00000471744 C17orf47Q8NEP4 570 aa14.03□□□□□ -0.16
SNX13-205ENST00000471744 CLHC1Q8NHS4 586 aa14.03□□□□□ -0.16
SNX13-205ENST00000471744 ACTRT2Q8TDY3 377 aa14.03□□□□□ -0.16
SNX13-205ENST00000471744 NPAS2Q99743 824 aa14.03□□□□□ -0.16
SNX13-205ENST00000471744 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms