RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 C2CD4DB7Z1M9 353 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 TSPAN4O14817 238 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 IL3P08700 152 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 CD27P26842 260 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 OR1D4P47884 311 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 ARHGAP8P85298 464 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 OR7A5Q15622 319 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 MOGQ16653 247 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 KCTD19Q17RG1 926 aaPredicted RBP8.19□□□□□ -1.1
CD47-204ENST00000471694 SPDYCQ5MJ68 293 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 AHSA2Q719I0 299 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 MAMDC2Q7Z304 686 aaPredicted RBP8.19□□□□□ -1.1
CD47-204ENST00000471694 OR8K3Q8NH51 312 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 ALG3Q92685 438 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 PCYT2Q99447 389 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 AIFM2Q9BRQ8 373 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 SLC6A16Q9GZN6 736 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 C12orf49Q9H741 205 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 A0A1W2PQ09 198 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 PNMTP11086 282 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 DPP4P27487 766 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 SLC1A3P43003 542 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 MLLT10P55197 1068 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 ERVK-8P63133 956 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 BCL2L15Q5TBC7 163 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 HMGN2P46Q86SG4 172 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 OR9A2Q8NGT5 310 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 PSMA8Q8TAA3 256 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 SPPL3Q8TCT6 385 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 THRSPQ92748 146 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 EHD1Q9H4M9 534 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 WASH6PQ9NQA3 447 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 FAM118AQ9NWS6 357 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 QPCTLQ9NXS2 382 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 CDH22Q9UJ99 828 aa8.19□□□□□ -1.1
CD47-204ENST00000471694 NKX6-3A6NJ46 265 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 FOXE1O00358 373 aaPredicted RBP8.18□□□□□ -1.1
CD47-204ENST00000471694 PPM1BO75688 479 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 RAB15P59190 212 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 KCTD18Q6PI47 426 aaPredicted RBP8.18□□□□□ -1.1
CD47-204ENST00000471694 DPY19L4Q7Z388 723 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 MRPL10Q7Z7H8 261 aaKnown RBP8.18□□□□□ -1.1
CD47-204ENST00000471694 NPAS3Q8IXF0 933 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 THAP4Q8WY91 577 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 CCDC74AQ96AQ1 378 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 SLC6A17Q9H1V8 727 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 OR51I1Q9H343 314 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 SRA1Q9HD15 236 aaKnown RBP8.18□□□□□ -1.1
CD47-204ENST00000471694 FKBP14Q9NWM8 211 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 ANKRD10Q9NXR5 420 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 RSL24D1Q9UHA3 163 aaKnown RBP8.18□□□□□ -1.1
CD47-204ENST00000471694 POLHQ9Y253 713 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 LOXL2Q9Y4K0 774 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 SIX3O95343 332 aaPredicted RBP8.18□□□□□ -1.1
CD47-204ENST00000471694 FCER2P06734 321 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 MRPL3P09001 348 aaKnown RBP8.18□□□□□ -1.1
CD47-204ENST00000471694 EBLN1P0CF75 366 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 JAM2P57087 298 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 ZP2Q05996 745 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 E2F2Q14209 437 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 FAM180BQ6P0A1 224 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 LIPIQ6XZB0 460 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 PRR7Q8TB68 274 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 TCTN2Q96GX1 697 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 SENP5Q96HI0 755 aaPredicted RBP8.18□□□□□ -1.1
CD47-204ENST00000471694 TRAPPC9Q96Q05 1148 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 MED18Q9BUE0 208 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.18□□□□□ -1.1
CD47-204ENST00000471694 NOSIPQ9Y314 301 aaKnown RBP8.18□□□□□ -1.1
CD47-204ENST00000471694 SLC9A3P48764 834 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 DUSP6Q16828 381 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 TSPAN33Q86UF1 283 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 LGI4Q8N135 537 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 MINDY1Q8N5J2 469 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 NR4A3Q92570 626 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 ZFP3Q96NJ6 502 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 CCDC115Q96NT0 180 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 ZNF559Q9BR84 538 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 HIF1ANQ9NWT6 349 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 DHDHQ9UQ10 334 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 FAM96BQ9Y3D0 163 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 SH2D7A6NKC9 451 aaPredicted RBP8.18□□□□□ -1.1
CD47-204ENST00000471694 G3V3Y1 287 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 IL1R2P27930 398 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 CST5P28325 142 aaPredicted RBP8.18□□□□□ -1.1
CD47-204ENST00000471694 AGTR2P50052 363 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 DNASE1L3Q13609 305 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 TAZQ16635 292 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 GPRIN1Q7Z2K8 1008 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 TMIEQ8NEW7 156 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 METTL2AQ96IZ6 378 aaKnown RBP8.18□□□□□ -1.1
CD47-204ENST00000471694 DEFB127Q9H1M4 99 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 NXT1Q9UKK6 140 aaKnown RBP8.18□□□□□ -1.1
CD47-204ENST00000471694 WIF1Q9Y5W5 379 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 DHFRP00374 187 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 IMPDH1P20839 514 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 YPEL5P62699 121 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 CRYZQ08257 329 aaKnown RBP8.18□□□□□ -1.1
CD47-204ENST00000471694 KIR2DS3Q14952 304 aa8.18□□□□□ -1.1
CD47-204ENST00000471694 WFDC8Q8IUA0 241 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms