RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 TANKQ92844 425 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 CMTM7Q96FZ5 175 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 SENP5Q96HI0 755 aaPredicted RBP8.38□□□□□ -1.07
CPSF4-211ENST00000471455 C18orf12Q96KH6 178 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 F2RL3Q96RI0 385 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 MAPKAP1Q9BPZ7 522 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 SLC6A15Q9H2J7 730 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 LIME1Q9H400 295 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 RHOJQ9H4E5 214 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 SEMA4BQ9NPR2 832 aaPredicted RBP8.38□□□□□ -1.07
CPSF4-211ENST00000471455 PRDM7Q9NQW5 492 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 BEX4Q9NWD9 120 aaPredicted RBP8.38□□□□□ -1.07
CPSF4-211ENST00000471455 TXNDC16Q9P2K2 825 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 ADGRE2Q9UHX3 823 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 RPH3AQ9Y2J0 694 aaPredicted RBP8.38□□□□□ -1.07
CPSF4-211ENST00000471455 ARHGAP21Q5T5U3 1957 aa8.38□□□□□ -1.07
CPSF4-211ENST00000471455 MAP1AP78559 2803 aaPredicted RBP8.37□□□□□ -1.07
CPSF4-211ENST00000471455 ANKRD33BA6NCL7 494 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 A6NHS1 94 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 LRRC3CA6NJW4 275 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 EEF1E1-BLOC1S5C9J1V9 151 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 ARHGEF9O43307 516 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 EEF1E1O43324 174 aaKnown RBP8.37□□□□□ -1.07
CPSF4-211ENST00000471455 ERN1O75460 977 aaKnown RBP8.37□□□□□ -1.07
CPSF4-211ENST00000471455 TRAPPC6AO75865 159 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 ATE1O95260 518 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 IGKV3-11P04433 115 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 ALOX15P16050 662 aaPredicted RBP8.37□□□□□ -1.07
CPSF4-211ENST00000471455 CEACAM8P31997 349 aaPredicted RBP8.37□□□□□ -1.07
CPSF4-211ENST00000471455 MASP1P48740 699 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 HSPA7P48741 367 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 PGGT1BP53609 377 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 NRG3P56975 720 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 TNFRSF17Q02223 184 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 ID2Q02363 134 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 LTBQ06643 244 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 DUSP8Q13202 625 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 CHIT1Q13231 466 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 DOC2AQ14183 400 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 RCAN2Q14206 197 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 ZNF460Q14592 562 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 RPS6KA2Q15349 733 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 PCBP2Q15366 365 aaKnown RBP eCLIP8.37□□□□□ -1.07
CPSF4-211ENST00000471455 NTRK2Q16620 822 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 SPRED3Q2MJR0 410 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 C6orf163Q5TEZ5 329 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 SHEQ5VZ18 495 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 HLA-DQA1Q5Y7H0 255 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 NSUN5P2Q63ZY6 315 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 MED27Q6P2C8 311 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 IGDCC3Q8IVU1 814 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 ST13P4Q8IZP2 240 aaPredicted RBP8.37□□□□□ -1.07
CPSF4-211ENST00000471455 PDPRQ8NCN5 879 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 OR10G3Q8NGC4 313 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 ZNF473Q8WTR7 871 aaKnown RBP8.37□□□□□ -1.07
CPSF4-211ENST00000471455 CDKL2Q92772 493 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 DIO2Q92813 273 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 ANKRD9Q96BM1 317 aaPredicted RBP8.37□□□□□ -1.07
CPSF4-211ENST00000471455 NTNG2Q96CW9 530 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 DTNBP1Q96EV8 351 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 OSBPL9Q96SU4 736 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 SECISBP2Q96T21 854 aaKnown RBP8.37□□□□□ -1.07
CPSF4-211ENST00000471455 TMEM79Q9BSE2 394 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 MS4A8Q9BY19 250 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 WWTR1Q9GZV5 400 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 PRDM14Q9GZV8 571 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 ACBD3Q9H3P7 528 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 GSX1Q9H4S2 264 aaPredicted RBP8.37□□□□□ -1.07
CPSF4-211ENST00000471455 RPF2Q9H7B2 306 aaKnown RBP8.37□□□□□ -1.07
CPSF4-211ENST00000471455 WDR41Q9HAD4 459 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 SNX15Q9NRS6 342 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 CD274Q9NZQ7 290 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 ZNF490Q9ULM2 529 aaPredicted RBP8.37□□□□□ -1.07
CPSF4-211ENST00000471455 PPP2R2CQ9Y2T4 447 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 CHCHD2Q9Y6H1 151 aaPredicted RBP8.37□□□□□ -1.07
CPSF4-211ENST00000471455 TEX264Q9Y6I9 313 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 IKBKGQ9Y6K9 419 aa8.37□□□□□ -1.07
CPSF4-211ENST00000471455 NSD1Q96L73 2696 aaPredicted RBP8.36□□□□□ -1.07
CPSF4-211ENST00000471455 MYOCOSA0A1B0GUC4 107 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 CD8B2A6NJW9 211 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 CLCA1A8K7I4 914 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 FGF17O60258 216 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 CCNT2O60583 730 aaKnown RBP8.36□□□□□ -1.07
CPSF4-211ENST00000471455 ZNF354AO60765 605 aaPredicted RBP8.36□□□□□ -1.07
CPSF4-211ENST00000471455 TBX6O95947 436 aaPredicted RBP8.36□□□□□ -1.07
CPSF4-211ENST00000471455 IL18BPO95998 194 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 C1QAP02745 245 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 INHBBP09529 407 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 RFPL3SP0C7P2 107 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 PCNAP12004 261 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 KRT15P19012 456 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 CTSSP25774 331 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 GALNSP34059 522 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 CASP2P42575 452 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 TRPC1P48995 793 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 CDK9P50750 372 aaKnown RBP8.36□□□□□ -1.07
CPSF4-211ENST00000471455 ARFIP1P53367 373 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 DCAF7P61962 342 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 HERVK_113P63132 956 aa8.36□□□□□ -1.07
CPSF4-211ENST00000471455 ERVK-8P63133 956 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms