RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.46■□□□□ 0.23
HSPG2-208ENST00000471322 COX20Q5RI15 118 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 TMEM71Q6P5X7 295 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 FAM92BQ6ZTR7 304 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 FAM86B1Q8N7N1 296 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 OR4D9Q8NGE8 314 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 MOAP1Q96BY2 351 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 CNTNAP3BQ96NU0 1288 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 CNTNAP3Q9BZ76 1288 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 KLHL25Q9H0H3 589 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 LYRM4Q9HD34 91 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 C5AR2Q9P296 337 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 CES1P1Q9UKY3 287 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 ZNF780BQ9Y6R6 833 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 SPACA6W5XKT8 324 aa16.46■□□□□ 0.23
HSPG2-208ENST00000471322 ANKRD11Q6UB99 2663 aaPredicted RBP16.45■□□□□ 0.22
HSPG2-208ENST00000471322 LOC105369274A0A096LPK9 316 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 LOC102723532A0A0G2JNH3 316 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 SAC3D1A6NKF1 404 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 P2RX6O15547 441 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 KIF1CO43896 1103 aaKnown RBP16.45■□□□□ 0.22
HSPG2-208ENST00000471322 SRPX2O60687 465 aaPredicted RBP16.45■□□□□ 0.22
HSPG2-208ENST00000471322 RASAL1O95294 804 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 ZNF682O95780 498 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 CST1P01037 141 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 NUDT7P0C024 238 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 GPC1P35052 558 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 CCT3P49368 545 aaKnown RBP16.45■□□□□ 0.22
HSPG2-208ENST00000471322 ANXA11P50995 505 aaKnown RBP16.45■□□□□ 0.22
HSPG2-208ENST00000471322 NCBP2P52298 156 aaKnown RBP eCLIP16.45■□□□□ 0.22
HSPG2-208ENST00000471322 DSTNP60981 165 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 HSPB3Q12988 150 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 NRF1Q16656 503 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 FRMPD2BQ6IN97 320 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 TMEM214Q6NUQ4 689 aaKnown RBP16.45■□□□□ 0.22
HSPG2-208ENST00000471322 TMEM64Q6YI46 380 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 CCDC80Q76M96 950 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 RAB11FIP2Q7L804 512 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 C6orf120Q7Z4R8 191 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 OR4N4Q8N0Y3 316 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 CBR4Q8N4T8 237 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 CSNK1A1LQ8N752 337 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 C19orf47Q8N9M1 422 aaKnown RBP16.45■□□□□ 0.22
HSPG2-208ENST00000471322 OR5AK3PQ8NH89 298 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 TCTN2Q96GX1 697 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 VPS50Q96JG6 964 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 TRAPPC9Q96Q05 1148 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 SLC29A1Q99808 456 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 MAPKAP1Q9BPZ7 522 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 GLIPR2Q9H4G4 154 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 SIRT3Q9NTG7 399 aaPredicted RBP16.45■□□□□ 0.22
HSPG2-208ENST00000471322 ZNF639Q9UID6 485 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 ACSL6Q9UKU0 697 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 OAZ3Q9UMX2 235 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 SLC22A7Q9Y694 548 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 EPG5Q9HCE0 2579 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 PGRMC2O15173 223 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 ERAL1O75616 437 aaKnown RBP16.45■□□□□ 0.22
HSPG2-208ENST00000471322 EIF2S1P05198 315 aaKnown RBP16.45■□□□□ 0.22
HSPG2-208ENST00000471322 ITIH1P19827 911 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 MAGEA2P43356 314 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 TXNL4AP83876 142 aaKnown RBP16.45■□□□□ 0.22
HSPG2-208ENST00000471322 CDK6Q00534 326 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 SQSTM1Q13501 440 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 SCARB2Q14108 478 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 MYBPC3Q14896 1274 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 CEBPEQ15744 281 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 DEFB134Q4QY38 66 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 WDR74Q6RFH5 385 aaPredicted RBP16.45■□□□□ 0.22
HSPG2-208ENST00000471322 CACTIN-AS1Q8N1I8 211 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 SFXN5Q8TD22 340 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 STRADBQ9C0K7 418 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 RAB33BQ9H082 229 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 EPB41L1Q9H4G0 881 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 IL1RAPQ9NPH3 570 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 BATF3Q9NR55 127 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 BAG5Q9UL15 447 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 ANGPT4Q9Y264 503 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 ZNF451Q9Y4E5 1061 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 LOXL2Q9Y4K0 774 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 AP4B1Q9Y6B7 739 aa16.45■□□□□ 0.22
HSPG2-208ENST00000471322 ACACAQ13085 2346 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 MAGEA13PA6NCF6 341 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 GNGT2O14610 69 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 ACOX3O15254 700 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 SUV39H1O43463 412 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 BRINP1O60477 761 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 MT-ND1P03886 318 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 ARAFP10398 606 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 CCL4P13236 92 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 ST6GAL1P15907 406 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 CPN2P22792 545 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 CCKBRP32239 447 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 SEPHS1P49903 392 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 TNFRSF17Q02223 184 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 NKG7Q16617 165 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 C18orf63Q68DL7 685 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 OR52E8Q6IFG1 317 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 NIPAL1Q6NVV3 410 aa16.44■□□□□ 0.22
HSPG2-208ENST00000471322 FAM180BQ6P0A1 224 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms