RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 MYOCOSA0A1B0GUC4 107 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 C5orf58C9J3I9 102 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 PLOD2O00469 737 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 NME4O00746 187 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 JRKO75564 520 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 SOX30O94993 753 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 TNFSF15O95150 251 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 AGR2O95994 175 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 CYC1P08574 325 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 ZGLP1P0C6A0 271 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 HSD17B1P14061 328 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 GALNSP34059 522 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 RORAP35398 523 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 ETV5P41161 510 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 MC3RP41968 323 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 GSK3BP49841 420 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 KHKP50053 298 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 PGDP52209 483 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 EMP2P54851 167 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 BTG2P78543 158 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 TRAP1Q12931 704 aaKnown RBP9.15□□□□□ -0.94
CCM2-204ENST00000470837 GAB1Q13480 694 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 CEACAM7Q14002 265 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 TRIM25Q14258 630 aaKnown RBP9.15□□□□□ -0.94
CCM2-204ENST00000470837 GNA13Q14344 377 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 RGNQ15493 299 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 ZNHIT3Q15649 155 aaPredicted RBP9.15□□□□□ -0.94
CCM2-204ENST00000470837 PRSS53Q2L4Q9 553 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 VWA2Q5GFL6 755 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.15□□□□□ -0.94
CCM2-204ENST00000470837 GCNT6Q5T4J0 391 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 ATAD3BQ5T9A4 648 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 MED25Q71SY5 747 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 SERPINA11Q86U17 422 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 DHFR2Q86XF0 187 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 PROSER1Q86XN7 944 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 RNF130Q86XS8 419 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 MSRB3Q8IXL7 192 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 ESX1Q8N693 406 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 SLC38A9Q8NBW4 561 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 GALNT6Q8NCL4 622 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 NUP43Q8NFH3 380 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 ADCY4Q8NFM4 1077 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 SUN3Q8TAQ9 357 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 ZNF675Q8TD23 568 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 JADE3Q92613 823 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 KAT2AQ92830 837 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 DAZLQ92904 295 aaKnown RBP9.15□□□□□ -0.94
CCM2-204ENST00000470837 NCLNQ969V3 563 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 PPWD1Q96BP3 646 aaKnown RBP9.15□□□□□ -0.94
CCM2-204ENST00000470837 ASB9Q96DX5 294 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 ELP4Q96EB1 424 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 ART5Q96L15 291 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 MS4A4EQ96PG1 132 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 CRB3Q9BUF7 120 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 CNPPD1Q9BV87 410 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 PIF1Q9H611 641 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 KAT8Q9H7Z6 458 aaKnown RBP9.15□□□□□ -0.94
CCM2-204ENST00000470837 WDR54Q9H977 334 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 CACYBPQ9HB71 228 aaKnown RBP9.15□□□□□ -0.94
CCM2-204ENST00000470837 CTSFQ9UBX1 484 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 SLC7A8Q9UHI5 535 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 RAPGEFL1Q9UHV5 662 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 MAGEL2Q9UJ55 1249 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 C3orf18Q9UK00 162 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 PACSIN3Q9UKS6 424 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 ACSL6Q9UKU0 697 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 PCDHGB3Q9Y5G1 929 aa9.15□□□□□ -0.94
CCM2-204ENST00000470837 EP300Q09472 2414 aaPredicted RBP9.15□□□□□ -0.94
CCM2-204ENST00000470837 ZFHX2Q9C0A1 2572 aaPredicted RBP9.15□□□□□ -0.95
CCM2-204ENST00000470837 SNRNP200O75643 2136 aaKnown RBP9.14□□□□□ -0.95
CCM2-204ENST00000470837 USP34Q70CQ2 3546 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 IGLV3-12A0A075B6K2 115 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 A0A087WV62 115 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 ELOVL7A1L3X0 281 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 PRORSD1PA6NEY8 169 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 DUXAA6NLW8 204 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 FAM220BPB1ANY3 271 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 C17orf105B2RV13 164 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 IDSB3KWA1 339 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 PCDH17O14917 1159 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 BRINP1O60477 761 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 PLOD3O60568 738 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 DKK1O94907 266 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 KCNK5O95279 499 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 ONECUT2O95948 504 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 IFI6P09912 130 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 ZNF28P17035 718 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 GPX2P18283 190 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 MATN1P21941 496 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 HTR1EP28566 365 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 PTPN6P29350 595 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 SLC5A2P31639 672 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 FOLR3P41439 243 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 OR4D2P58180 307 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 DSTNP60981 165 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 RPS15P62841 145 aaKnown RBP9.14□□□□□ -0.95
CCM2-204ENST00000470837 GABREP78334 506 aa9.14□□□□□ -0.95
CCM2-204ENST00000470837 IGLV3-21P80748 117 aaPredicted RBP9.14□□□□□ -0.95
CCM2-204ENST00000470837 HPCAP84074 193 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms