RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 ZFP36L1Q07352 338 aaKnown RBP5.94□□□□□ -1.46
PTCD3-208ENST00000469585 SEMA3AQ14563 771 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 ARHGAP19Q14CB8 494 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 TEX35Q5T0J7 233 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 KCTD16Q68DU8 428 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 DUPD1Q68J44 220 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 CAPRIN2Q6IMN6 1127 aaKnown RBP5.94□□□□□ -1.46
PTCD3-208ENST00000469585 ZNF66Q6ZN08 573 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 FAM83HQ6ZRV2 1179 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-208ENST00000469585 ZNF534Q76KX8 674 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 PRSS42Q7Z5A4 293 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 ADCK2Q7Z695 626 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 TBC1D1Q86TI0 1168 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-208ENST00000469585 DENND6AQ8IWF6 608 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 KRT222Q8N1A0 295 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 ESX1Q8N693 406 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 PTGR2Q8N8N7 351 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-208ENST00000469585 TTC29Q8NA56 475 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-208ENST00000469585 OR52E1Q8NGJ3 308 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 OR5AR1Q8NGP9 310 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 FBXO25Q8TCJ0 367 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.94□□□□□ -1.46
PTCD3-208ENST00000469585 ART4Q93070 314 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 RMDN2Q96LZ7 410 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 FCRL4Q96PJ5 515 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 CYTH2Q99418 400 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 GPR21Q99679 349 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 EGFL8Q99944 293 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 LRRC1Q9BTT6 524 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 TM2D2Q9BX73 214 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 KRTAP4-5Q9BYR2 181 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 OR52A5Q9H2C5 316 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 CNOT10Q9H9A5 744 aaKnown RBP5.94□□□□□ -1.46
PTCD3-208ENST00000469585 PLEKHA2Q9HB19 425 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 MLXIPLQ9NP71 852 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 ARL8BQ9NVJ2 186 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 MARCH4Q9P2E8 410 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-208ENST00000469585 ZNF624Q9P2J8 865 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-208ENST00000469585 WDR37Q9Y2I8 494 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 TEX264Q9Y6I9 313 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 U3KQA8 63 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 SCN8AQ9UQD0 1980 aa5.94□□□□□ -1.46
PTCD3-208ENST00000469585 MN1Q10571 1320 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-208ENST00000469585 ZFC3H1O60293 1989 aaKnown RBP5.93□□□□□ -1.46
PTCD3-208ENST00000469585 SPTBN4Q9H254 2564 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 A0A087WUV0 522 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-208ENST00000469585 A0A0J9YY10 115 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 SLC5A10A0PJK1 596 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 SYCE1LA8MT33 242 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 IQCF5A8MTL0 148 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 E7EQ34 232 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 TXNDC9O14530 226 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 RASGRF2O14827 1237 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 SLC16A5O15375 505 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 PRPF4O43172 522 aaKnown RBP eCLIP5.93□□□□□ -1.46
PTCD3-208ENST00000469585 KLK10O43240 276 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 HNRNPRO43390 633 aaKnown RBP5.93□□□□□ -1.46
PTCD3-208ENST00000469585 NIPSNAP2O75323 286 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 TUBBP07437 444 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 RHOXF2BP0C7M4 288 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 LIPCP11150 499 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 NELFEP18615 380 aaKnown RBP5.93□□□□□ -1.46
PTCD3-208ENST00000469585 CD9P21926 228 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 HRH2P25021 359 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 CNTFP26441 200 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 CRABP2P29373 138 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 PDHA2P29803 388 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 SOX2P48431 317 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 ARCN1P48444 511 aaKnown RBP5.93□□□□□ -1.46
PTCD3-208ENST00000469585 PCP4P48539 62 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 SERPINB9P50453 376 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 AP1S2P56377 157 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 RPS15P62841 145 aaKnown RBP5.93□□□□□ -1.46
PTCD3-208ENST00000469585 SMN1Q16637 294 aaKnown RBP5.93□□□□□ -1.46
PTCD3-208ENST00000469585 GRTP1Q5TC63 336 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 STEAP4Q687X5 459 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 SPESP1Q6UW49 350 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 CYS1Q717R9 158 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 ADAMTSL2Q86TH1 951 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 CPOQ8IVL8 374 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 CNTN4Q8IWV2 1026 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 TCAIMQ8N3R3 496 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 ADPRHL1Q8NDY3 354 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 OR9A1PQ8NGU1 263 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 SMPDL3AQ92484 453 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 LINGO1Q96FE5 620 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 MED8Q96G25 268 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 ZNF764Q96H86 408 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-208ENST00000469585 NAF1Q96HR8 494 aaKnown RBP5.93□□□□□ -1.46
PTCD3-208ENST00000469585 C5orf34Q96MH7 638 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 OR6C1Q96RD1 312 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 RHOXF2Q9BQY4 288 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 HAUS8Q9BT25 410 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 P2RY12Q9H244 342 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 RHOJQ9H4E5 214 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 PARVBQ9HBI1 364 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 POPDC3Q9HBV1 291 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 MRPS30Q9NP92 439 aaKnown RBP5.93□□□□□ -1.46
PTCD3-208ENST00000469585 CCDC177Q9NQR7 707 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-208ENST00000469585 FBXO8Q9NRD0 319 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms