RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 CPA3P15088 417 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 SLC7A2P52569 658 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 SNU13P55769 128 aaKnown RBP3.12□□□□□ -1.91
RBM39-226ENST00000468086 GIT2Q14161 759 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 KRT31Q15323 416 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 RPS6KA1Q15418 735 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 TGIF1Q15583 401 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 HAGHQ16775 308 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 FAM133BQ5BKY9 247 aaKnown RBP3.12□□□□□ -1.91
RBM39-226ENST00000468086 CCDC158Q5M9N0 1113 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 TAF3Q5VWG9 929 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 FAM219BQ5XKK7 198 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 TMED8Q6PL24 325 aaPredicted RBP3.12□□□□□ -1.91
RBM39-226ENST00000468086 LINC00696Q6ZRV3 163 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 FAM47EQ6ZV65 393 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 GPR142Q7Z601 462 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 TMEM126BQ8IUX1 230 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 OR8H3Q8N146 312 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 GPR137CQ8N3F9 429 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 TFB1MQ8WVM0 346 aaKnown RBP3.12□□□□□ -1.91
RBM39-226ENST00000468086 AP2M1Q96CW1 435 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 PANX3Q96QZ0 392 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 RNF41Q9H4P4 317 aaPredicted RBP3.12□□□□□ -1.91
RBM39-226ENST00000468086 TIGARQ9NQ88 270 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 TAS2R16Q9NYV7 291 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 SPG21Q9NZD8 308 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 TUBGCP4Q9UGJ1 667 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 EXOC7Q9UPT5 735 aa3.12□□□□□ -1.91
RBM39-226ENST00000468086 KIAA1217Q5T5P2 1943 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 NME6O75414 186 aaPredicted RBP3.11□□□□□ -1.91
RBM39-226ENST00000468086 APBB3O95704 486 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 TXNDC12O95881 172 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 EZRP15311 586 aaKnown RBP3.11□□□□□ -1.91
RBM39-226ENST00000468086 STIP1P31948 543 aaKnown RBP3.11□□□□□ -1.91
RBM39-226ENST00000468086 TNFSF10P50591 281 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 HLCSP50747 726 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 KCNK10P57789 538 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 STX1AQ16623 288 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 SHROOM1Q2M3G4 852 aaPredicted RBP3.11□□□□□ -1.91
RBM39-226ENST00000468086 FUT11Q495W5 492 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 MPPE1Q53F39 396 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 HERC4Q5GLZ8 1057 aaPredicted RBP3.11□□□□□ -1.91
RBM39-226ENST00000468086 C9orf129Q5T035 196 aaKnown RBP3.11□□□□□ -1.91
RBM39-226ENST00000468086 MFSD7Q6UXD7 560 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 STOX1Q6ZVD7 989 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 GALNTL5Q7Z4T8 443 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 SIDT2Q8NBJ9 832 aaKnown RBP3.11□□□□□ -1.91
RBM39-226ENST00000468086 OR6M1Q8NGM8 313 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 HAS2Q92819 552 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 PIWIL1Q96J94 861 aaKnown RBP3.11□□□□□ -1.91
RBM39-226ENST00000468086 PRAM1Q96QH2 718 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 OR5M11Q96RB7 305 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 TRIM9Q9C026 710 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 SLC26A1Q9H2B4 701 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 MAGEF1Q9HAY2 307 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 DNAJC11Q9NVH1 559 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 MOKQ9UQ07 419 aa3.11□□□□□ -1.91
RBM39-226ENST00000468086 A0A0A6YYD4 124 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 TRABD2BA6NFA1 517 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 YJEFN3A6XGL0 299 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 EFCAB7A8K855 629 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 TTI1O43156 1089 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 DUSP14O95147 198 aaKnown RBP3.1□□□□□ -1.91
RBM39-226ENST00000468086 TPBGLP0DKB5 382 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 TCF7P36402 384 aaPredicted RBP3.1□□□□□ -1.91
RBM39-226ENST00000468086 ASIC1P78348 528 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 SCARB2Q14108 478 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 TYSND1Q2T9J0 566 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 APOOLQ6UXV4 268 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 APOBEC3FQ8IUX4 373 aaKnown RBP3.1□□□□□ -1.91
RBM39-226ENST00000468086 CCDC83Q8IWF9 413 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 LINC01006Q8NI28 216 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 U2AF1L4Q8WU68 220 aaKnown RBP3.1□□□□□ -1.91
RBM39-226ENST00000468086 UBTD2Q8WUN7 234 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 FAM122AQ96E09 287 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 NUS1Q96E22 293 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 MAGEB18Q96M61 343 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 GANQ9H2C0 597 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 RNPEPL1Q9HAU8 725 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 SLC25A19Q9HC21 320 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 MRTO4Q9UKD2 239 aaKnown RBP3.1□□□□□ -1.91
RBM39-226ENST00000468086 EMCNQ9ULC0 261 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 LIPT1Q9Y234 373 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 AFF2P51816 1311 aa3.1□□□□□ -1.91
RBM39-226ENST00000468086 SH3PXD2BA1X283 911 aa3.09□□□□□ -1.91
RBM39-226ENST00000468086 EPOPA6NHQ4 379 aa3.09□□□□□ -1.91
RBM39-226ENST00000468086 SLC15A5A6NIM6 579 aa3.09□□□□□ -1.91
RBM39-226ENST00000468086 A8MX80 341 aa3.09□□□□□ -1.91
RBM39-226ENST00000468086 IGHV3-9P01782 118 aa3.09□□□□□ -1.91
RBM39-226ENST00000468086 LAMP1P11279 417 aa3.09□□□□□ -1.91
RBM39-226ENST00000468086 NDST1P52848 882 aa3.09□□□□□ -1.91
RBM39-226ENST00000468086 OVGP1Q12889 678 aa3.09□□□□□ -1.91
RBM39-226ENST00000468086 TRADDQ15628 312 aa3.09□□□□□ -1.91
RBM39-226ENST00000468086 PAN3Q58A45 887 aaKnown RBP3.09□□□□□ -1.91
RBM39-226ENST00000468086 ACER2Q5QJU3 275 aa3.09□□□□□ -1.91
RBM39-226ENST00000468086 KCTD11Q693B1 232 aa3.09□□□□□ -1.91
RBM39-226ENST00000468086 TATDN1Q6P1N9 297 aa3.09□□□□□ -1.91
RBM39-226ENST00000468086 Q8N9G6 341 aaPredicted RBP3.09□□□□□ -1.91
RBM39-226ENST00000468086 OR4L1Q8NH43 312 aa3.09□□□□□ -1.91
RBM39-226ENST00000468086 ZNF671Q8TAW3 534 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms