RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	NBAS	A2RRP1	2371 aa		11.32	□□□□□ -0.6
CTNS-205	ENST00000467663	PRSS51	A0A1B0GVH4	220 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	RNASET2	O00584	256 aa	Known RBP	11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	FBP2	O00757	339 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	FOXS1	O43638	330 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	DNAJA2	O60884	412 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	KCNH1	O95259	989 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	FAM58BP	P0C7Q3	252 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	NQO1	P15559	274 aa	Known RBP	11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	FBL	P22087	321 aa	Known RBP	11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	TACR1	P25103	407 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	BUD31	P41223	144 aa	Predicted RBP	11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	CPA2	P48052	419 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	NME5	P56597	212 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	CORO7	P57737	925 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	TAS2R50	P59544	299 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	SLAMF1	Q13291	335 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	NFYC	Q13952	458 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	INPP5J	Q15735	1006 aa	Predicted RBP	11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	SPRED3	Q2MJR0	410 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	VWA2	Q5GFL6	755 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	SPANXN4	Q5MJ08	99 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	FAM219B	Q5XKK7	198 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	RINL	Q6ZS11	566 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	C10orf67	Q8IYJ2	551 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	EFCAB3	Q8N7B9	438 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	GALNT11	Q8NCW6	608 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	OR11G2	Q8NGC1	345 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	MIEF2	Q96C03	454 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	PPCDC	Q96CD2	204 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	TM4SF18	Q96CE8	201 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	LRRC58	Q96CX6	371 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	VPS50	Q96JG6	964 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	EGLN2	Q96KS0	407 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	CRB3	Q9BUF7	120 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	DUSP26	Q9BV47	211 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	MFRP	Q9BY79	579 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	ANKH	Q9HCJ1	492 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	SLAMF7	Q9NQ25	335 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	BCAP29	Q9UHQ4	241 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	PCDHGB4	Q9UN71	923 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	GMEB1	Q9Y692	573 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	CCDC88C	Q9P219	2028 aa		11.31	□□□□□ -0.6
CTNS-205	ENST00000467663	SCN3A	Q9NY46	2000 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663		A0A1W2PQ72	361 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	SYNDIG1L	A6NDD5	238 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	GABRR3	A8MPY1	467 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663		H0YIG0	161 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	SAP18	O00422	153 aa	Known RBP	11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	P2RX6	O15547	441 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	ZCCHC18	P0CG32	403 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	ZNF888	P0CJ79	500 aa	Predicted RBP	11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	PPIB	P23284	216 aa	Known RBP	11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	PGM1	P36871	562 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	BTN3A2	P78410	334 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	SRSF1	Q07955	248 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	BIK	Q13323	160 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	MLC1	Q15049	377 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	PLEKHN1	Q494U1	663 aa	Predicted RBP	11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	TIGD2	Q4W5G0	525 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	LRIF1	Q5T3J3	769 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	C6orf163	Q5TEZ5	329 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	C8orf82	Q6P1X6	216 aa	Predicted RBP	11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	IGFL2	Q6UWQ7	119 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	BNC2	Q6ZN30	1099 aa	Predicted RBP	11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	LAPTM4B	Q86VI4	370 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	DEFB107A	Q8IZN7	70 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	AMER3	Q8N944	861 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	KCT2	Q8NC54	265 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	OR8J3	Q8NGG0	315 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	TM9SF4	Q92544	642 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	PHF12	Q96QT6	1004 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	NPAS2	Q99743	824 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	TGIF2	Q9GZN2	237 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	KLHL31	Q9H511	634 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	SPAG4	Q9NPE6	437 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	C14orf105	Q9NVL8	296 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	MAP10	Q9P2G4	905 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	TRPC4	Q9UBN4	977 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	C3orf18	Q9UK00	162 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	VPS4A	Q9UN37	437 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	CORO2B	Q9UQ03	480 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	B3GNT3	Q9Y2A9	372 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	ASB4	Q9Y574	426 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	PCDHA9	Q9Y5H5	950 aa		11.3	□□□□□ -0.6
CTNS-205	ENST00000467663	FLNC	Q14315	2725 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663		A0A096LPI6	279 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663		A0A0A6YYC8	382 aa	Predicted RBP	11.29	□□□□□ -0.6
CTNS-205	ENST00000467663		I3L1I5	382 aa	Predicted RBP	11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	PCDH17	O14917	1159 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	GALR3	O60755	368 aa	Predicted RBP	11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	ALOX12B	O75342	701 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	SH3BGRL	O75368	114 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	NSA2	O95478	260 aa	Known RBP	11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	HP	P00738	406 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	IL3	P08700	152 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	IL10	P22301	178 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	ITGA3	P26006	1051 aa		11.29	□□□□□ -0.6
CTNS-205	ENST00000467663	PPP2R1B	P30154	601 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms