RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 NDST1P52848 882 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 SNU13P55769 128 aaKnown RBP1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 ST8SIA6P61647 398 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 ARF5P84085 180 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 WASHC5Q12768 1159 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 SLC17A1Q14916 467 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 PPP1R3AQ16821 1122 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 CDO1Q16878 200 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 SLC39A12Q504Y0 691 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 PAN3Q58A45 887 aaKnown RBP1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 CASC4Q6P4E1 433 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 KCTD9Q7L273 389 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 C4orf19Q8IY42 314 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 CLYBLQ8N0X4 340 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 CEND1Q8N111 149 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 ZNF619Q8N2I2 560 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 OR1K1Q8NGR3 316 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 PSMA8Q8TAA3 256 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 VN1R17PQ8TDU5 208 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 RIT1Q92963 219 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 FAM122AQ96E09 287 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 BSCL2Q96G97 398 aaPredicted RBP1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 RBM18Q96H35 190 aaKnown RBP1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 ATP6V0BQ99437 205 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 PARK7Q99497 189 aaKnown RBP1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 EBF4Q9BQW3 602 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 ST6GALNAC5Q9BVH7 336 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 VIPAS39Q9H9C1 493 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 ISG20L2Q9H9L3 353 aaKnown RBP1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 DNAJC17Q9NVM6 304 aaKnown RBP1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 SENP1Q9P0U3 644 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 VPS18Q9P253 973 aa1.81□□□□□ -2.12
GTF3C3-209ENST00000466862 RAI1Q7Z5J4 1906 aaPredicted RBP1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 SMIM30A4D0T7 59 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 PINLYPA6NC86 204 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 FAM231BA6NCW3 169 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 TMCO5BA8MYB1 307 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 TCP11X1B4DZS4 312 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 C19orf81C9J6K1 198 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 NEDD8-MDP1E9PL57 170 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 SELENOFO60613 162 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 STAM2O75886 525 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 OLFM2O95897 454 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 CALCAP01258 141 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 FCGR3AP08637 254 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 HMOX1P09601 288 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 OR1D2P34982 312 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 ID1P41134 155 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 FRKP42685 505 aaPredicted RBP1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 STX17P56962 302 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 RPL27P61353 136 aaKnown RBP1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 GSTO1P78417 241 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 NPRL3Q12980 569 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 CBX3Q13185 183 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 ANKRD55Q3KP44 614 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 KBTBD12Q3ZCT8 623 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 FUT11Q495W5 492 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 PARP10Q53GL7 1025 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 ETFRF1Q6IPR1 90 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 TMEM270Q6UE05 265 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 CATSPER4Q7RTX7 472 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 PEX5LQ8IYB4 626 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 SMYD1Q8NB12 490 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 UXS1Q8NBZ7 420 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 LPCAT1Q8NF37 534 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 PNPLA2Q96AD5 504 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 SLCO4A1Q96BD0 722 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 TECTBQ96PL2 329 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 TMEM237Q96Q45 408 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 ZNF350Q9GZX5 532 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 TNMDQ9H2S6 317 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 MINDY3Q9H8M7 445 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 MRPL17Q9NRX2 175 aaKnown RBP1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 ABCC13Q9NSE7 274 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 PDRG1Q9NUG6 133 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 TRPC4Q9UBN4 977 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 PFASO15067 1338 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 ACEP12821 1306 aa1.8□□□□□ -2.12
GTF3C3-209ENST00000466862 SPRR5A0A1B0GTR4 108 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 CCDC162PA2VCL2 907 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 KRT87PA6NCN2 255 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 CCDC69A6NI79 296 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 SDR42E2A6NKP2 422 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 TTI1O43156 1089 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 SEC22BO75396 215 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 CLN5O75503 358 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 CRCPO75575 148 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 B3GALNT1O75752 331 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 BCAS2O75934 225 aaPredicted RBP1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 DUSP14O95147 198 aaKnown RBP1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 SLC16A8O95907 504 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 GH1P01241 217 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 PGAM2P15259 253 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 GAP43P17677 238 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 GLRA1P23415 457 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 GJB2P29033 226 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 CCND3P30281 292 aaPredicted RBP1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 CTNNB1P35222 781 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 MAGEA9P43362 315 aa1.79□□□□□ -2.12
GTF3C3-209ENST00000466862 NME5P56597 212 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms