RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 DDX47Q9H0S4 455 aaKnown RBP13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 NEUROD4Q9HD90 331 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 PSD3Q9NYI0 1048 aa13.33□□□□□ -0.28
DNMT3A-207ENST00000461228 IQANK1A0A1B0GTG1 560 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 NCF1BA6NI72 391 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 NCF1CA8MVU1 366 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 ACTL6AO96019 429 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 S100BP04271 92 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 SLC35E2BP0CK96 405 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 SLC35E2P0CK97 266 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 NR2F6P10588 404 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 NCF1P14598 390 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 STMN1P16949 149 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 NAGAP17050 411 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 TCP1P17987 556 aaKnown RBP13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 HERVK_113P63132 956 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 ERVK-8P63133 956 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 CUL3Q13618 768 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 C10orf62Q5T681 223 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 FNDC7Q5VTL7 733 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 TMEM198Q66K66 360 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 OR4C11Q6IEV9 310 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 PRSS57Q6UWY2 283 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 SNX31Q8N9S9 440 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 SPPL2AQ8TCT8 520 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 CDKL2Q92772 493 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 RGMAQ96B86 450 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 RILPQ96NA2 401 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 GAL3ST4Q96RP7 486 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 RBBP8Q99708 897 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 CPNE1Q99829 537 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 ERVK-6Q9BXR3 956 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 GSX1Q9H4S2 264 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 ERVK-19Q9WJR5 959 aa13.32□□□□□ -0.28
DNMT3A-207ENST00000461228 A0A0A6YYD5 115 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 K7EPI3 171 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 PLPP1O14494 284 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 KERAO60938 352 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 SEMA3DO95025 777 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 GPR75O95800 540 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 CPN1P15169 458 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 CD53P19397 219 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 CHMP24386 653 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 NRG3P56975 720 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 PHEXP78562 749 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 FUT7Q11130 342 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 SNTA1Q13424 505 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 RCAN2Q14206 197 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 PCBP2Q15366 365 aaKnown RBP eCLIP13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 OR4D1Q15615 310 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 OR52E8Q6IFG1 317 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 PACS2Q86VP3 889 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 CXorf67Q86X51 503 aaPredicted RBP13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 FBXO36Q8NEA4 188 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 DIO2Q92813 273 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 RIT1Q92963 219 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 REPS1Q96D71 796 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 PWWP2AQ96N64 755 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 PIGMQ9H3S5 423 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 DDX31Q9H8H2 851 aaKnown RBP13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 PCDHGA11Q9Y5H2 935 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 MXRA5Q9NR99 2828 aa13.31□□□□□ -0.28
DNMT3A-207ENST00000461228 H0YIV9 168 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 HRKO00198 91 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 RTCAO00442 366 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 OR10H2O60403 315 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 ERN1O75460 977 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 CCDC166P0CW27 439 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 PTPN6P29350 595 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 GCKP35557 465 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 GP5P40197 560 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 RAP1GDS1P52306 607 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 HNRNPH2P55795 449 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 RAB10P61026 200 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 PSPHP78330 225 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 DR1Q01658 176 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 ID2Q02363 134 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 SLAMF1Q13291 335 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 LIPJQ5W064 366 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 NUDT13Q86X67 352 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 GALNT12Q8IXK2 581 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 GBP7Q8N8V2 638 aaPredicted RBP13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 HUS1BQ8NHY5 278 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 STAG3L4Q8TBR4 150 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 WDYHV1Q96HA8 205 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 ATOH8Q96SQ7 321 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 TM9SF2Q99805 663 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 UGT2B28Q9BY64 529 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 WDR41Q9HAD4 459 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 CXorf21Q9HAI6 301 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 ALKBH4Q9NXW9 302 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 CD274Q9NZQ7 290 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 TXNDC16Q9P2K2 825 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 OPTCQ9UBM4 332 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 RNF112Q9ULX5 631 aa13.3□□□□□ -0.28
DNMT3A-207ENST00000461228 C2orf92A0A1B0GVN3 265 aa13.29□□□□□ -0.28
DNMT3A-207ENST00000461228 EEF1E1-BLOC1S5C9J1V9 151 aa13.29□□□□□ -0.28
DNMT3A-207ENST00000461228 EIF3HO15372 352 aaKnown RBP eCLIP13.29□□□□□ -0.28
DNMT3A-207ENST00000461228 ARHGEF9O43307 516 aa13.29□□□□□ -0.28
DNMT3A-207ENST00000461228 EEF1E1O43324 174 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms