RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 MKRN2OSH3BPM6 223 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 TMPRSS11DO60235 418 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 CEACAM4O75871 244 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 RSL1D1O76021 490 aaKnown RBP10.39□□□□□ -0.75
APTX-209ENST00000460940 HSPA4LO95757 839 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 FAM58BPP0C7Q3 252 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 NR2F6P10588 404 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 PCSK6P29122 969 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 NUP107P57740 925 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 ACSM2AQ08AH3 577 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 SLC13A2Q13183 592 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 KCNAB2Q13303 367 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 PCOLCEQ15113 449 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 ACSM2BQ68CK6 577 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 CLEC6AQ6EIG7 209 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 FAAH2Q6GMR7 532 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 LANCL3Q6ZV70 420 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 CLYBLQ8N0X4 340 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 SHISA5Q8N114 240 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 CATSPER1Q8NEC5 780 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 CHTF18Q8WVB6 975 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 TSLPQ969D9 159 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 C8orf44Q96CB5 159 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 THTPAQ9BU02 230 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 WDR41Q9HAD4 459 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 SIRT5Q9NXA8 310 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 RSL24D1Q9UHA3 163 aaKnown RBP10.39□□□□□ -0.75
APTX-209ENST00000460940 FBXW2Q9UKT8 454 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 TRAF6Q9Y4K3 522 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 ASB4Q9Y574 426 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 PCDHGA9Q9Y5G4 932 aaKnown RBP10.39□□□□□ -0.75
APTX-209ENST00000460940 LOC400499M0QZD8 3231 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 ATRXP46100 2492 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 PCSK5Q92824 1860 aa10.39□□□□□ -0.75
APTX-209ENST00000460940 NPIPB8E9PQR5 432 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 H3BNX3 289 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 SLC28A1O00337 649 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 RGS14O43566 566 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 CTNSO60931 367 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 KLK1P06870 262 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 GSTT2P0CG29 244 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 GSTT2BP0CG30 244 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 ICAM2P13598 275 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 MAOAP21397 527 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 PRPH2P23942 346 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 PEX2P28328 305 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 ARRB2P32121 409 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 GSTM5P46439 218 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 HSPA13P48723 471 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 MAPK12P53778 367 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 OR4D2P58180 307 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 ABCE1P61221 599 aaKnown RBP10.38□□□□□ -0.75
APTX-209ENST00000460940 TRA2BP62995 288 aaKnown RBP10.38□□□□□ -0.75
APTX-209ENST00000460940 BTKQ06187 659 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 BIKQ13323 160 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 SERTAD2Q14140 314 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 CCNYL2Q5T2Q4 361 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 IRAK1BP1Q5VVH5 260 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 GALNT18Q6P9A2 607 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 SLC2A7Q6PXP3 512 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 GALNT16Q8N428 558 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 C1orf52Q8N6N3 182 aaKnown RBP10.38□□□□□ -0.75
APTX-209ENST00000460940 GIPC3Q8TF64 312 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 TANKQ92844 425 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 LPAR4Q99677 370 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 GRIP2Q9C0E4 1043 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 NMUR2Q9GZQ4 415 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 RPF2Q9H7B2 306 aaKnown RBP10.38□□□□□ -0.75
APTX-209ENST00000460940 ZNF160Q9HCG1 818 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 TBC1D23Q9NUY8 699 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 UBAP1Q9NZ09 502 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 DTNAQ9Y4J8 743 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 ATG4BQ9Y4P1 393 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 DNAJC15Q9Y5T4 150 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 CCDC88CQ9P219 2028 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 FUOMA2VDF0 154 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 PROM1O43490 865 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 SERPINA7P05543 415 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 FAM87AP0C7U9 286 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 BGNP21810 368 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 TIA1P31483 386 aaKnown RBP eCLIP10.38□□□□□ -0.75
APTX-209ENST00000460940 BCAP31P51572 246 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 HNRNPFP52597 415 aaKnown RBP10.38□□□□□ -0.75
APTX-209ENST00000460940 BTG2P78543 158 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 HMGCS1Q01581 520 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 KCNC4Q03721 635 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 CHAF1BQ13112 559 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 STX3Q13277 289 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 TLR1Q15399 786 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 EXT1Q16394 746 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 FAM219BQ5XKK7 198 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 LPCAT4Q643R3 524 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 PLAG1Q6DJT9 500 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 JMJD6Q6NYC1 403 aaPredicted RBP10.38□□□□□ -0.75
APTX-209ENST00000460940 PCSK4Q6UW60 755 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 RNF111Q6ZNA4 994 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 NANOGNBQ7Z5D8 188 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 TMEM52Q8NDY8 209 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 TWIST2Q8WVJ9 160 aa10.38□□□□□ -0.75
APTX-209ENST00000460940 C11orf24Q96F05 449 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms