RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 CD8BP10966 210 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 ETFAP13804 333 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 GTF2F2P13984 249 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 EFR3AQ14156 821 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 GRM2Q14416 872 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 ATXN7L3Q14CW9 347 aaPredicted RBP11.5□□□□□ -0.57
SEC16A-207ENST00000453963 FAM214AQ32MH5 1076 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 CDKL4Q5MAI5 379 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 KCTD9Q7L273 389 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 TRAM1L1Q8N609 369 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 SHDQ96IW2 340 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 PCDH10Q9P2E7 1040 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 NUFIP1Q9UHK0 495 aaKnown RBP11.5□□□□□ -0.57
SEC16A-207ENST00000453963 CFAP20Q9Y6A4 193 aaKnown RBP11.5□□□□□ -0.57
SEC16A-207ENST00000453963 A0A1B0GVI7 797 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 A0A1B0GVT2 93 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 CFIP05156 583 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 FHP07954 510 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 HSD11B1P28845 292 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 AFF1P51825 1210 aaKnown RBP11.5□□□□□ -0.57
SEC16A-207ENST00000453963 MEF2AQ02078 507 aaPredicted RBP11.5□□□□□ -0.57
SEC16A-207ENST00000453963 RHEBQ15382 184 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 ZNF789Q5FWF6 425 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 LETMD1Q6P1Q0 360 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 ZNF550Q7Z398 422 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 CLECL1Q8IZS7 167 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 C7orf57Q8NEG2 295 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 KCNN1Q92952 543 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 DHRS1Q96LJ7 313 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 SMG9Q9H0W8 520 aaKnown RBP11.5□□□□□ -0.57
SEC16A-207ENST00000453963 VAPAQ9P0L0 249 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 GRHPRQ9UBQ7 328 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 FARSAQ9Y285 508 aaKnown RBP11.5□□□□□ -0.57
SEC16A-207ENST00000453963 HMX3A6NHT5 357 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 EMC8O43402 210 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 MRPL3P09001 348 aaKnown RBP11.5□□□□□ -0.57
SEC16A-207ENST00000453963 ZNF865P0CJ78 1059 aaPredicted RBP11.5□□□□□ -0.57
SEC16A-207ENST00000453963 FOXA1P55317 472 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 SNRPD2P62316 118 aaKnown RBP11.5□□□□□ -0.57
SEC16A-207ENST00000453963 ACTA2P62736 377 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 ACTG2P63267 376 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 SELENOWP63302 87 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 FGL1Q08830 312 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 IRF5Q13568 498 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 EOGTQ5NDL2 527 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 CPZQ66K79 652 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 PLAG1Q6DJT9 500 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 CNTN4Q8IWV2 1026 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 POGLUT1Q8NBL1 392 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 SETD7Q8WTS6 366 aaKnown RBP11.5□□□□□ -0.57
SEC16A-207ENST00000453963 CASTOR1Q8WTX7 329 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 GLYATL1Q969I3 302 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 ZNF700Q9H0M5 742 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 ACTL8Q9H568 366 aa11.5□□□□□ -0.57
SEC16A-207ENST00000453963 CUEDC1Q9NWM3 386 aaPredicted RBP11.5□□□□□ -0.57
SEC16A-207ENST00000453963 TSPAN6O43657 245 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 JRKO75564 520 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 SOX30O94993 753 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 AHSA1O95433 338 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 CSTBP04080 98 aaKnown RBP11.49□□□□□ -0.57
SEC16A-207ENST00000453963 IQCF3P0C7M6 154 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 LAMP1P11279 417 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 RPL10P27635 214 aaKnown RBP11.49□□□□□ -0.57
SEC16A-207ENST00000453963 GGT2P36268 569 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 ITPRIPL2Q3MIP1 535 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 UGT3A2Q3SY77 523 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 PLEKHN1Q494U1 663 aaPredicted RBP11.49□□□□□ -0.57
SEC16A-207ENST00000453963 OR4K5Q8NGD3 323 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 OR4K14Q8NGD5 310 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.49□□□□□ -0.57
SEC16A-207ENST00000453963 ADAMTS19Q8TE59 1207 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 RELTQ969Z4 430 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 ZBTB20Q9HC78 741 aaPredicted RBP11.49□□□□□ -0.57
SEC16A-207ENST00000453963 RP1L1Q8IWN7 2480 aaPredicted RBP11.49□□□□□ -0.57
SEC16A-207ENST00000453963 TEX13CA0A0J9YWL9 993 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 CPED1A4D0V7 1026 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 BLOC1S5-TXNDC5H3BN57 136 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 AP1G1O43747 822 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 NPR2P20594 1047 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 WNT4P56705 351 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 SNTA1Q13424 505 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 TAZQ16635 292 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 C11orf91Q3C1V1 193 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 SERPINA11Q86U17 422 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 NRROSQ86YC3 692 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 FOXRED2Q8IWF2 684 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 CCDC116Q8IYX3 515 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 OR4E2Q8NGC2 313 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 OR4K17Q8NGC6 315 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 HS6ST2Q96MM7 605 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 C20orf27Q9GZN8 174 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 SEC61A2Q9H9S3 476 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 ACSL6Q9UKU0 697 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 KCNK6Q9Y257 313 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 CLDN24A6NM45 220 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 H7BY64 318 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 GJB5O95377 273 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 SOX2P48431 317 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 CHAF1BQ13112 559 aa11.49□□□□□ -0.57
SEC16A-207ENST00000453963 GAS6Q14393 721 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms