RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 RASL10BQ96S79 203 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 TSPAN18Q96SJ8 248 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 NAP1L3Q99457 506 aaPredicted RBP3.96□□□□□ -1.78
LINC00393-202ENST00000452852 PLIN2Q99541 437 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 NDNQ99608 321 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 DDX50Q9BQ39 737 aaKnown RBP3.96□□□□□ -1.78
LINC00393-202ENST00000452852 RPP25Q9BUL9 199 aaKnown RBP3.96□□□□□ -1.78
LINC00393-202ENST00000452852 TRMT61BQ9BVS5 477 aaKnown RBP3.96□□□□□ -1.78
LINC00393-202ENST00000452852 SLC39A8Q9C0K1 460 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 CARD9Q9H257 536 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 CXCL16Q9H2A7 254 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 ARRDC1-AS1Q9H2J1 176 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 RPF1Q9H9Y2 349 aaKnown RBP3.96□□□□□ -1.78
LINC00393-202ENST00000452852 A4GALTQ9NPC4 353 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 ZCCHC3Q9NUD5 404 aaKnown RBP3.96□□□□□ -1.78
LINC00393-202ENST00000452852 OCIAD1Q9NX40 245 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.96□□□□□ -1.78
LINC00393-202ENST00000452852 PKD2L2Q9NZM6 624 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 NDUFA13Q9P0J0 144 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 SIX4Q9UIU6 781 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 NOCTQ9UK39 431 aaKnown RBP3.96□□□□□ -1.78
LINC00393-202ENST00000452852 UBQLN1Q9UMX0 589 aaKnown RBP3.96□□□□□ -1.78
LINC00393-202ENST00000452852 NDRG2Q9UN36 371 aaKnown RBP3.96□□□□□ -1.78
LINC00393-202ENST00000452852 PROCRQ9UNN8 238 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 ZNF510Q9Y2H8 683 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 ZDBF2Q9HCK1 2354 aa3.96□□□□□ -1.78
LINC00393-202ENST00000452852 COL4A2P08572 1712 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 HELZP42694 1942 aaKnown RBP3.95□□□□□ -1.78
LINC00393-202ENST00000452852 A0A087X0K7 114 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 A0A0G2JNG1 304 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 A0A0G2JPF8 293 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 TRBV2A0A0J9YWF9 115 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 A0A1W2PRB8 838 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 CFAP73A6NFT4 308 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 PRR32B1ATL7 298 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 HNRNPCL3B7ZW38 293 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 ZNF587BE7ETH6 402 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 OGTO15294 1046 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 ACSL4O60488 711 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 FGF19O95750 216 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 PRSS2P07478 247 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 CLTAP09496 248 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 HNRNPCL4P0DMR1 293 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 ODC1P11926 461 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 SKILP12757 684 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 CPA3P15088 417 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 AREGP15514 252 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 PSMC3P17980 439 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 CYP3A5P20815 502 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 DGKAP23743 735 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 CHRNA3P32297 505 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 RPL21P46778 160 aaKnown RBP3.95□□□□□ -1.78
LINC00393-202ENST00000452852 RPS9P46781 194 aaKnown RBP3.95□□□□□ -1.78
LINC00393-202ENST00000452852 PDX1P52945 283 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 SLC26A5P58743 744 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 RPS18P62269 152 aaKnown RBP3.95□□□□□ -1.78
LINC00393-202ENST00000452852 RELQ04864 619 aaPredicted RBP3.95□□□□□ -1.78
LINC00393-202ENST00000452852 EEF1A2Q05639 463 aaKnown RBP3.95□□□□□ -1.78
LINC00393-202ENST00000452852 SPAG1Q07617 926 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 KEAP1Q14145 624 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 GAMTQ14353 236 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 KIR2DS5Q14953 304 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 RBBP7Q16576 425 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 FAM78AQ5JUQ0 283 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 EFHC1Q5JVL4 640 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 LYSMD4Q5XG99 296 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 ZNF770Q6IQ21 691 aaPredicted RBP3.95□□□□□ -1.78
LINC00393-202ENST00000452852 TRNP1Q6NT89 227 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 ARMCX5Q6P1M9 558 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 CORO6Q6QEF8 472 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 ABRAXAS1Q6UWZ7 409 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 ALKAL1Q6UXT8 129 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 LINGO4Q6UY18 593 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 PLEKHM3Q6ZWE6 761 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 PIWIL4Q7Z3Z4 852 aaKnown RBP3.95□□□□□ -1.78
LINC00393-202ENST00000452852 ITIH5Q86UX2 942 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 GPBP1Q86WP2 473 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 CD302Q8IX05 232 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.95□□□□□ -1.78
LINC00393-202ENST00000452852 DAW1Q8N136 415 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 KDM8Q8N371 416 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 RBMXL3Q8N7X1 1067 aaKnown RBP3.95□□□□□ -1.78
LINC00393-202ENST00000452852 CCDC63Q8NA47 563 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 ZNF114Q8NC26 417 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 PPFIBP2Q8ND30 876 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 TMEM161BQ8NDZ6 487 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 TMEM185AQ8NFB2 350 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 SPATA3Q8NHX4 192 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 SAP25Q8TEE9 199 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 TMED6Q8WW62 240 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 FAM3CQ92520 227 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 SMARCD2Q92925 531 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 SYAP1Q96A49 352 aaPredicted RBP3.95□□□□□ -1.78
LINC00393-202ENST00000452852 LINGO1Q96FE5 620 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 SAMD8Q96LT4 415 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 PGLYRP2Q96PD5 576 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 C17orf62Q9BQA9 187 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 NEURL2Q9BR09 285 aa3.95□□□□□ -1.78
LINC00393-202ENST00000452852 DPH5Q9H2P9 285 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms