RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 SPANXN4Q5MJ08 99 aa22.42■■□□□ 1.18
CPSF4-207ENST00000451876 BORAQ6PGQ7 559 aa22.42■■□□□ 1.18
CPSF4-207ENST00000451876 PAOXQ6QHF9 649 aa22.42■■□□□ 1.18
CPSF4-207ENST00000451876 FAM111BQ6SJ93 734 aa22.42■■□□□ 1.18
CPSF4-207ENST00000451876 MIER2Q8N344 545 aa22.42■■□□□ 1.18
CPSF4-207ENST00000451876 ZNF721Q8TF20 911 aa22.42■■□□□ 1.18
CPSF4-207ENST00000451876 APOBEC4Q8WW27 367 aaKnown RBP22.42■■□□□ 1.18
CPSF4-207ENST00000451876 NCLNQ969V3 563 aa22.42■■□□□ 1.18
CPSF4-207ENST00000451876 ITGAMP11215 1152 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 NCF2P19878 526 aaPredicted RBP22.41■■□□□ 1.18
CPSF4-207ENST00000451876 GPX3P22352 226 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 ITGA3P26006 1051 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 NUP214P35658 2090 aaPredicted RBP22.41■■□□□ 1.18
CPSF4-207ENST00000451876 ZNF267Q14586 743 aaPredicted RBP22.41■■□□□ 1.18
CPSF4-207ENST00000451876 FAM174BQ3ZCQ3 159 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 OR4F3Q6IEY1 312 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 ZNF551Q7Z340 670 aaPredicted RBP22.41■■□□□ 1.18
CPSF4-207ENST00000451876 SPATA21Q7Z572 469 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 CPLX4Q7Z7G2 160 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 CPAMD8Q8IZJ3 1885 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 GALNT16Q8N428 558 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 MORN4Q8NDC4 146 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 SIMC1Q8NDZ2 872 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 BOD1L1Q8NFC6 3051 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 M1APQ8TC57 530 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 ELP5Q8TE02 316 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 SENP5Q96HI0 755 aaPredicted RBP22.41■■□□□ 1.18
CPSF4-207ENST00000451876 FBXL20Q96IG2 436 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 THOC3Q96J01 351 aaKnown RBP22.41■■□□□ 1.18
CPSF4-207ENST00000451876 PRPF18Q99633 342 aaKnown RBP22.41■■□□□ 1.18
CPSF4-207ENST00000451876 DUSP26Q9BV47 211 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 NSRP1Q9H0G5 558 aaKnown RBP22.41■■□□□ 1.18
CPSF4-207ENST00000451876 ZNF385DQ9H6B1 395 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 ANKRA2Q9H9E1 313 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 MMP25Q9NPA2 562 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 ATAD3AQ9NVI7 634 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 ZIM2Q9NZV7 527 aa22.41■■□□□ 1.18
CPSF4-207ENST00000451876 A6NL46 340 aa22.4■■□□□ 1.18
CPSF4-207ENST00000451876 SLC22A3O75751 556 aa22.4■■□□□ 1.18
CPSF4-207ENST00000451876 IGKV3-11P04433 115 aa22.4■■□□□ 1.18
CPSF4-207ENST00000451876 SERPINA7P05543 415 aa22.4■■□□□ 1.18
CPSF4-207ENST00000451876 CCL11P51671 97 aa22.4■■□□□ 1.18
CPSF4-207ENST00000451876 CLNS1AP54105 237 aaKnown RBP22.4■■□□□ 1.18
CPSF4-207ENST00000451876 STX1BP61266 288 aa22.4■■□□□ 1.18
CPSF4-207ENST00000451876 PHC1P78364 1004 aa22.4■■□□□ 1.18
CPSF4-207ENST00000451876 RAPSNQ13702 412 aa22.4■■□□□ 1.18
CPSF4-207ENST00000451876 ZNF628Q5EBL2 1059 aa22.4■■□□□ 1.18
CPSF4-207ENST00000451876 KBTBD2Q8IY47 623 aa22.4■■□□□ 1.18
CPSF4-207ENST00000451876 VWA5B2Q8N398 1253 aa22.4■■□□□ 1.18
CPSF4-207ENST00000451876 OR1N1Q8NGS0 311 aa22.4■■□□□ 1.18
CPSF4-207ENST00000451876 KAT2AQ92830 837 aa22.4■■□□□ 1.18
CPSF4-207ENST00000451876 CTHRC1Q96CG8 243 aa22.4■■□□□ 1.18
CPSF4-207ENST00000451876 NUDT9Q9BW91 350 aa22.4■■□□□ 1.18
CPSF4-207ENST00000451876 BHLHE41Q9C0J9 482 aaPredicted RBP22.4■■□□□ 1.18
CPSF4-207ENST00000451876 MAPRE3Q9UPY8 281 aa22.4■■□□□ 1.18
CPSF4-207ENST00000451876 SHOX2O60902 331 aaPredicted RBP22.39■■□□□ 1.18
CPSF4-207ENST00000451876 CLPSP04118 112 aa22.39■■□□□ 1.18
CPSF4-207ENST00000451876 ITGB2P05107 769 aa22.39■■□□□ 1.18
CPSF4-207ENST00000451876 CD1EP15812 388 aa22.39■■□□□ 1.18
CPSF4-207ENST00000451876 SSTR4P31391 388 aa22.39■■□□□ 1.18
CPSF4-207ENST00000451876 MRPL19P49406 292 aaKnown RBP22.39■■□□□ 1.18
CPSF4-207ENST00000451876 DGKQP52824 942 aa22.39■■□□□ 1.18
CPSF4-207ENST00000451876 WNT3P56703 355 aa22.39■■□□□ 1.18
CPSF4-207ENST00000451876 HSPB3Q12988 150 aa22.39■■□□□ 1.18
CPSF4-207ENST00000451876 TRMT12Q53H54 448 aaKnown RBP22.39■■□□□ 1.18
CPSF4-207ENST00000451876 OR8J2Q8NGG1 315 aa22.39■■□□□ 1.18
CPSF4-207ENST00000451876 ZNF675Q8TD23 568 aa22.39■■□□□ 1.18
CPSF4-207ENST00000451876 VMP1Q96GC9 406 aa22.39■■□□□ 1.18
CPSF4-207ENST00000451876 SEMA4CQ9C0C4 833 aa22.39■■□□□ 1.18
CPSF4-207ENST00000451876 TRIM33Q9UPN9 1127 aa22.39■■□□□ 1.18
CPSF4-207ENST00000451876 DYRK3O43781 588 aa22.39■■□□□ 1.17
CPSF4-207ENST00000451876 SNX3O60493 162 aa22.39■■□□□ 1.17
CPSF4-207ENST00000451876 ICAM2P13598 275 aa22.39■■□□□ 1.17
CPSF4-207ENST00000451876 PCSK2P16519 638 aa22.39■■□□□ 1.17
CPSF4-207ENST00000451876 S1PR1P21453 382 aa22.39■■□□□ 1.17
CPSF4-207ENST00000451876 KIR3DL1P43629 444 aa22.39■■□□□ 1.17
CPSF4-207ENST00000451876 SOX8P57073 446 aa22.39■■□□□ 1.17
CPSF4-207ENST00000451876 MAP4K2Q12851 820 aa22.39■■□□□ 1.17
CPSF4-207ENST00000451876 METTL21CQ5VZV1 264 aa22.39■■□□□ 1.17
CPSF4-207ENST00000451876 FDCSPQ8NFU4 85 aa22.39■■□□□ 1.17
CPSF4-207ENST00000451876 BRIX1Q8TDN6 353 aaKnown RBP22.39■■□□□ 1.17
CPSF4-207ENST00000451876 PSMF1Q92530 271 aa22.39■■□□□ 1.17
CPSF4-207ENST00000451876 ZBED6CLQ96FA7 236 aaPredicted RBP22.39■■□□□ 1.17
CPSF4-207ENST00000451876 EPN3Q9H201 632 aa22.39■■□□□ 1.17
CPSF4-207ENST00000451876 ACSS1Q9NUB1 689 aaPredicted RBP22.39■■□□□ 1.17
CPSF4-207ENST00000451876 TNRC6AQ8NDV7 1962 aaKnown RBP22.38■■□□□ 1.17
CPSF4-207ENST00000451876 TRBV11-1A0A0K0K1C0 115 aa22.38■■□□□ 1.17
CPSF4-207ENST00000451876 PRKNO60260 465 aaPredicted RBP22.38■■□□□ 1.17
CPSF4-207ENST00000451876 ATP4BP51164 291 aa22.38■■□□□ 1.17
CPSF4-207ENST00000451876 SRSF11Q05519 484 aaKnown RBP22.38■■□□□ 1.17
CPSF4-207ENST00000451876 FUT7Q11130 342 aa22.38■■□□□ 1.17
CPSF4-207ENST00000451876 DUSP8Q13202 625 aa22.38■■□□□ 1.17
CPSF4-207ENST00000451876 SQLEQ14534 574 aa22.38■■□□□ 1.17
CPSF4-207ENST00000451876 EXOSC7Q15024 291 aaKnown RBP22.38■■□□□ 1.17
CPSF4-207ENST00000451876 DPY19L1Q2PZI1 675 aa22.38■■□□□ 1.17
CPSF4-207ENST00000451876 TMEM107Q6UX40 140 aa22.38■■□□□ 1.17
CPSF4-207ENST00000451876 CLECL1Q8IZS7 167 aa22.38■■□□□ 1.17
CPSF4-207ENST00000451876 SIRT6Q8N6T7 355 aa22.38■■□□□ 1.17
CPSF4-207ENST00000451876 OR7G2Q8NG99 324 aa22.38■■□□□ 1.17
CPSF4-207ENST00000451876 LHPPQ9H008 270 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms