RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.13■□□□□ 0.01
RPUSD3-209ENST00000451405 PHF3Q92576 2039 aaKnown RBP15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 NINQ8N4C6 2090 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 NKX2-6A6NCS4 301 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 SMIM24O75264 130 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 LRATO95237 230 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 CT62P0C5K7 136 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 COL6A2P12110 1019 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 DRD2P14416 443 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 SSTR4P31391 388 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 GALNSP34059 522 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 CDH13P55290 713 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 SLC10A1Q14973 349 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 EBPQ15125 230 aaKnown RBP15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 PRAMEF20Q5VT98 475 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 TTC19Q6DKK2 380 aaPredicted RBP15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 TMEM64Q6YI46 380 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 SLC29A4Q7RTT9 530 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 MILR1Q7Z6M3 343 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 OR10G3Q8NGC4 313 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 LILRB4Q8NHJ6 448 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 SPACA9Q96E40 222 aaPredicted RBP15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 SMC6Q96SB8 1091 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 PELOQ9BRX2 385 aaKnown RBP15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 TSPYL1Q9H0U9 437 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 WDR41Q9HAD4 459 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 CXorf21Q9HAI6 301 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 ZNF180Q9UJW8 692 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 ZNF225Q9UK10 706 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 TMCO1Q9UM00 188 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 IKBKGQ9Y6K9 419 aa15.12■□□□□ 0.01
RPUSD3-209ENST00000451405 HCFC1P51610 2035 aa15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 SEMA3DO95025 777 aa15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 FBXO45P0C2W1 286 aa15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 GCAP28676 217 aa15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 TSNAXIP1Q2TAA8 658 aa15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 RTL6Q6ICC9 239 aa15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 LETMD1Q6P1Q0 360 aa15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 ZNF585AQ6P3V2 769 aa15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 METTL4Q8N3J2 472 aa15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 ZNF441Q8N8Z8 693 aa15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 FAM13CQ8NE31 585 aa15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 OR5M3Q8NGP4 307 aa15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 ZNF483Q8TF39 744 aaPredicted RBP15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 RND1Q92730 232 aa15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 TREX2Q9BQ50 279 aaPredicted RBP15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 MRPL57Q9BQC6 102 aaKnown RBP15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 TMUB1Q9BVT8 246 aa15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 MRPL46Q9H2W6 279 aaKnown RBP15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 CNOT11Q9UKZ1 510 aaKnown RBP15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 CHCHD2Q9Y6H1 151 aaPredicted RBP15.11■□□□□ 0.01
RPUSD3-209ENST00000451405 A0A087WUV0 522 aaPredicted RBP15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 C2orf92A0A1B0GVN3 265 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 OR14I1A6ND48 311 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 OR6C76A6NM76 312 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 A8MT66 165 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 AQP7O14520 342 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 SUSD5O60279 629 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 TOXO94900 526 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 PDYNP01213 254 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 RPS17P08708 135 aaKnown RBP15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 CTAGE8P0CG41 777 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 ENDOUP21128 410 aaKnown RBP15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 S1PR1P21453 382 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 CNTFP26441 200 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 PIK3R1P27986 724 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 CHRNB4P30926 498 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 MAN2A2P49641 1150 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 XKP51811 444 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 PPP2R2AP63151 447 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 TFF3Q07654 80 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 FUT7Q11130 342 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 IFT88Q13099 833 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 GGTA1PQ4G0N0 100 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 GLE1Q53GS7 698 aaKnown RBP15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 CCNYL2Q5T2Q4 361 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 OR52E8Q6IFG1 317 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 CTAGE4Q8IX94 777 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 FBXW8Q8N3Y1 598 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 ZNF615Q8N8J6 731 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 CHDHQ8NE62 594 aaPredicted RBP15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 MNS1Q8NEH6 495 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 OR4K14Q8NGD5 310 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 ASB5Q8WWX0 329 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 LDAHQ9H6V9 325 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 ZFP64Q9NPA5 681 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 NPDC1Q9NQX5 325 aaPredicted RBP15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 TMEM216Q9P0N5 145 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 SPRR3Q9UBC9 169 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 ACAD8Q9UKU7 415 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 CES1P1Q9UKY3 287 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 SLC12A4Q9UP95 1085 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 FAM215AQ9Y5M1 114 aa15.1■□□□□ 0.01
RPUSD3-209ENST00000451405 ANKHD1Q8IWZ3 2542 aaKnown RBP15.09■□□□□ 0.01
RPUSD3-209ENST00000451405 TRGV5A0A0B4J1U4 118 aa15.09■□□□□ 0.01
RPUSD3-209ENST00000451405 LRRC3CA6NJW4 275 aa15.09■□□□□ 0.01
RPUSD3-209ENST00000451405 FAM90A27PA6NNH2 459 aa15.09■□□□□ 0.01
RPUSD3-209ENST00000451405 BCKDKO14874 412 aa15.09■□□□□ 0.01
RPUSD3-209ENST00000451405 OR4F21O95013 312 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms