RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 SETDB1Q15047 1291 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 TMEM198Q66K66 360 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 BICRALQ6AI39 1079 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 ZNF441Q8N8Z8 693 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 RELL2Q8NC24 303 aaPredicted RBP14.25□□□□□ -0.13
TRA2A-203ENST00000448549 SPATA4Q8NEY3 305 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 RHEBL1Q8TAI7 183 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 NINJ1Q92982 152 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 REPS1Q96D71 796 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 ZNF597Q96LX8 424 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 TIMP4Q99727 224 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 CXXC4Q9H2H0 198 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 WDR41Q9HAD4 459 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 GRPEL1Q9HAV7 217 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 RASSF1Q9NS23 344 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 ST6GALNAC2Q9UJ37 374 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 RNF11Q9Y3C5 154 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 AHRRA9YTQ3 701 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 DVL2O14641 736 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 TP53I11O14683 189 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 PGRMC2O15173 223 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 TRAPPC6AO75865 159 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 ACSL3O95573 720 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 EPPINO95925 133 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 C2P06681 752 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 STX2P32856 288 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 GALNSP34059 522 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 PIK3CGP48736 1102 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 CRYZQ08257 329 aaKnown RBP14.24□□□□□ -0.13
TRA2A-203ENST00000448549 C2orf54Q08AI8 447 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 CUL3Q13618 768 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 RPS6KA2Q15349 733 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 TRADDQ15628 312 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 CEBPEQ15744 281 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 FAM83EQ2M2I3 478 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 ACSF3Q4G176 576 aaPredicted RBP14.24□□□□□ -0.13
TRA2A-203ENST00000448549 TBCELQ5QJ74 424 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 TP53INP1Q96A56 240 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 MRRFQ96E11 262 aaKnown RBP14.24□□□□□ -0.13
TRA2A-203ENST00000448549 RILPQ96NA2 401 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 SH3GL2Q99962 352 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 IPPKQ9H8X2 491 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 CXorf21Q9HAI6 301 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 MED13LQ71F56 2210 aa14.24□□□□□ -0.13
TRA2A-203ENST00000448549 INTS1Q8N201 2190 aaKnown RBP14.24□□□□□ -0.13
TRA2A-203ENST00000448549 A0A087X1B8 175 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 FAM221AA4D161 298 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 CAPN14A8MX76 684 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 CEACAM8P31997 349 aaPredicted RBP14.23□□□□□ -0.13
TRA2A-203ENST00000448549 PEX19P40855 299 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 ASCL1P50553 236 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 ALDH18A1P54886 795 aaKnown RBP14.23□□□□□ -0.13
TRA2A-203ENST00000448549 GTF2H2Q13888 395 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 PCBP2Q15366 365 aaKnown RBP eCLIP14.23□□□□□ -0.132e-6■■■■□ 23.1
TRA2A-203ENST00000448549 MROH9Q5TGP6 573 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 HLA-DQA1Q5Y7H0 255 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 GTF2H2CQ6P1K8 395 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 GOLGA7Q7Z5G4 137 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 NUDT13Q86X67 352 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 TGIF2LYQ8IUE0 185 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 GALNT12Q8IXK2 581 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 CHDHQ8NE62 594 aaPredicted RBP14.23□□□□□ -0.13
TRA2A-203ENST00000448549 WDR20Q8TBZ3 569 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 FBXO25Q8TCJ0 367 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 SPPL2AQ8TCT8 520 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 RNASE6Q93091 150 aaKnown RBP14.23□□□□□ -0.13
TRA2A-203ENST00000448549 RMND5BQ96G75 393 aaPredicted RBP14.23□□□□□ -0.13
TRA2A-203ENST00000448549 POM121Q96HA1 1249 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 GNRHR2Q96P88 292 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 ANGPTL4Q9BY76 406 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 SNX15Q9NRS6 342 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 RYDENQ9NUL5 291 aaKnown RBP14.23□□□□□ -0.13
TRA2A-203ENST00000448549 TEX10Q9NXF1 929 aaPredicted RBP14.23□□□□□ -0.13
TRA2A-203ENST00000448549 PLEKHA6Q9Y2H5 1048 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 SLC6A5Q9Y345 797 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 NPFFR2Q9Y5X5 522 aa14.23□□□□□ -0.13
TRA2A-203ENST00000448549 PHF3Q92576 2039 aaKnown RBP14.22□□□□□ -0.13
TRA2A-203ENST00000448549 HMX2A2RU54 273 aa14.22□□□□□ -0.13
TRA2A-203ENST00000448549 A6NNC1 897 aa14.22□□□□□ -0.13
TRA2A-203ENST00000448549 FOXE1O00358 373 aaPredicted RBP14.22□□□□□ -0.13
TRA2A-203ENST00000448549 UGDHO60701 494 aa14.22□□□□□ -0.13
TRA2A-203ENST00000448549 SNX4O95219 450 aa14.22□□□□□ -0.13
TRA2A-203ENST00000448549 SIX3O95343 332 aaPredicted RBP14.22□□□□□ -0.13
TRA2A-203ENST00000448549 HPNP05981 417 aa14.22□□□□□ -0.13
TRA2A-203ENST00000448549 CT62P0C5K7 136 aa14.22□□□□□ -0.13
TRA2A-203ENST00000448549 KLK2P20151 261 aa14.22□□□□□ -0.13
TRA2A-203ENST00000448549 PIK3R1P27986 724 aa14.22□□□□□ -0.13
TRA2A-203ENST00000448549 TIMP3P35625 211 aa14.22□□□□□ -0.13
TRA2A-203ENST00000448549 MASP1P48740 699 aa14.22□□□□□ -0.13
TRA2A-203ENST00000448549 CDK9P50750 372 aaKnown RBP14.22□□□□□ -0.13
TRA2A-203ENST00000448549 CAV1Q03135 178 aa14.22□□□□□ -0.13
TRA2A-203ENST00000448549 NAB1Q13506 487 aa14.22□□□□□ -0.13
TRA2A-203ENST00000448549 ACAP2Q15057 778 aa14.22□□□□□ -0.13
TRA2A-203ENST00000448549 KRTAP21-3Q3LHN1 58 aa14.22□□□□□ -0.13
TRA2A-203ENST00000448549 FLYWCH1Q4VC44 716 aa14.22□□□□□ -0.13
TRA2A-203ENST00000448549 FNDC7Q5VTL7 733 aa14.22□□□□□ -0.13
TRA2A-203ENST00000448549 OR52E8Q6IFG1 317 aa14.22□□□□□ -0.13
TRA2A-203ENST00000448549 POMZP3Q6PJE2 187 aa14.22□□□□□ -0.13
TRA2A-203ENST00000448549 ZDHHC24Q6UX98 284 aa14.22□□□□□ -0.13
TRA2A-203ENST00000448549 PACS2Q86VP3 889 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms