RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 ZBTB18Q99592 522 aa13.09□□□□□ -0.31
CTSS-202ENST00000448301 ELAC2Q9BQ52 826 aaKnown RBP13.09□□□□□ -0.31
CTSS-202ENST00000448301 DUSP26Q9BV47 211 aa13.09□□□□□ -0.31
CTSS-202ENST00000448301 FAM107BQ9H098 131 aa13.09□□□□□ -0.31
CTSS-202ENST00000448301 ING2Q9H160 280 aa13.09□□□□□ -0.31
CTSS-202ENST00000448301 ZNF385DQ9H6B1 395 aa13.09□□□□□ -0.31
CTSS-202ENST00000448301 MMP25Q9NPA2 562 aa13.09□□□□□ -0.31
CTSS-202ENST00000448301 SLAMF7Q9NQ25 335 aa13.09□□□□□ -0.31
CTSS-202ENST00000448301 ACSS1Q9NUB1 689 aaPredicted RBP13.09□□□□□ -0.31
CTSS-202ENST00000448301 TMEM45AQ9NWC5 275 aa13.09□□□□□ -0.31
CTSS-202ENST00000448301 MAT2BQ9NZL9 334 aa13.09□□□□□ -0.31
CTSS-202ENST00000448301 MED13Q9UHV7 2174 aa13.09□□□□□ -0.31
CTSS-202ENST00000448301 MASP2O00187 686 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 DDAH2O95865 285 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 ITGB2P05107 769 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 SERPINA7P05543 415 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 IFI6P09912 130 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 CT62P0C5K7 136 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 NCF2P19878 526 aaPredicted RBP13.08□□□□□ -0.32
CTSS-202ENST00000448301 GPX3P22352 226 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 IL12AP29459 219 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 KIR3DL1P43629 444 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 Q0VFX4 171 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 MGAT2Q10469 447 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 MAP4K2Q12851 820 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 CHAF1BQ13112 559 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 ZNF628Q5EBL2 1059 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 SPANXN4Q5MJ08 99 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 BORAQ6PGQ7 559 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 GPR155Q7Z3F1 870 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 APCDD1LQ8NCL9 501 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 OR9A2Q8NGT5 310 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 ELP5Q8TE02 316 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 ZNF721Q8TF20 911 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 APOBEC4Q8WW27 367 aaKnown RBP13.08□□□□□ -0.32
CTSS-202ENST00000448301 NCLNQ969V3 563 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 CTHRC1Q96CG8 243 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 CRELD1Q96HD1 420 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 SEMA4CQ9C0C4 833 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 GLIPR2Q9H4G4 154 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 MRGBPQ9NV56 204 aa13.08□□□□□ -0.32
CTSS-202ENST00000448301 IGKV3-11P04433 115 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 ZFP36L2P47974 494 aaKnown RBP13.07□□□□□ -0.32
CTSS-202ENST00000448301 CLCN2P51788 898 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 PGDP52209 483 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 WNT3P56703 355 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 FUT7Q11130 342 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 ZNF267Q14586 743 aaPredicted RBP13.07□□□□□ -0.32
CTSS-202ENST00000448301 LTB4RQ15722 352 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 PGS1Q32NB8 556 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 FAM174BQ3ZCQ3 159 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 OR4F3Q6IEY1 312 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 JMJD6Q6NYC1 403 aaPredicted RBP13.07□□□□□ -0.32
CTSS-202ENST00000448301 PAOXQ6QHF9 649 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 VWA5B2Q8N398 1253 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 GALNT16Q8N428 558 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 CPSF7Q8N684 471 aaKnown RBP13.07□□□□□ -0.32
CTSS-202ENST00000448301 ADCY4Q8NFM4 1077 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 OR9I1Q8NGQ6 314 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 ERP27Q96DN0 273 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 SENP5Q96HI0 755 aaPredicted RBP13.07□□□□□ -0.32
CTSS-202ENST00000448301 CNPPD1Q9BV87 410 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 OR8D2Q9GZM6 311 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 LHPPQ9H008 270 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 RABEP2Q9H5N1 569 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 FAM120CQ9NX05 1096 aaKnown RBP13.07□□□□□ -0.32
CTSS-202ENST00000448301 COPS7AQ9UBW8 275 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 ZNF639Q9UID6 485 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 ERVK-19Q9WJR5 959 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 ZZEF1O43149 2961 aa13.07□□□□□ -0.32
CTSS-202ENST00000448301 TPRP12270 2363 aaKnown RBP13.07□□□□□ -0.32
CTSS-202ENST00000448301 A0A1W2PRB8 838 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 FAM234BA2RU67 622 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 HRKO00198 91 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 PLOD2O00469 737 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 RNASET2O00584 256 aaKnown RBP13.06□□□□□ -0.32
CTSS-202ENST00000448301 SCN2BO60939 215 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 CEACAM4O75871 244 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 IL6P05231 212 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 PGRP06401 933 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 CELA2AP08217 269 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 ITGA3P26006 1051 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 S100A3P33764 101 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 PTGER1P34995 402 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 SOX18P35713 384 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 POLR2JP52435 117 aaKnown RBP13.06□□□□□ -0.32
CTSS-202ENST00000448301 MANFP55145 182 aaKnown RBP13.06□□□□□ -0.32
CTSS-202ENST00000448301 HSPB3Q12988 150 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 TBR1Q16650 682 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 COL28A1Q2UY09 1125 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 ANXA8L1Q5VT79 327 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 FAM111BQ6SJ93 734 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 ZNF551Q7Z340 670 aaPredicted RBP13.06□□□□□ -0.32
CTSS-202ENST00000448301 PIGWQ7Z7B1 504 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 AMER2Q8N7J2 671 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 OR7G1Q8NGA0 311 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 OR8K3Q8NH51 312 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 OR5P2Q8WZ92 322 aa13.06□□□□□ -0.32
CTSS-202ENST00000448301 THOC3Q96J01 351 aaKnown RBP13.06□□□□□ -0.32
CTSS-202ENST00000448301 NUDT9Q9BW91 350 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms