RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 RAB3IL1Q8TBN0 382 aa16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 C19orf60Q96EN9 201 aa16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 CNRIP1Q96F85 164 aaPredicted RBP16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 C5orf34Q96MH7 638 aa16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 SH3GL2Q99962 352 aa16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 BRINP2Q9C0B6 783 aa16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 LRFN1Q9P244 771 aa16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 COPG1Q9Y678 874 aaKnown RBP16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 CROCCQ5TZA2 2017 aa16.21■□□□□ 0.18
SMARCAL1-209ENST00000444508 MYO18BQ8IUG5 2567 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 OR6C76A6NM76 312 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 HMGB1P1B2RPK0 211 aaPredicted RBP16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 WWP2O00308 870 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 PEX11AO75192 247 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 CD46P15529 392 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 HK2P52789 917 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 PDCD2Q16342 344 aaPredicted RBP16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 INAQ16352 499 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 RFTN2Q52LD8 501 aaPredicted RBP16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 PRR30Q53SZ7 412 aaPredicted RBP16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 TTMPQ5BVD1 217 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 ZNF766Q5HY98 468 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 RPUSD3Q6P087 351 aaKnown RBP16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 FAM180BQ6P0A1 224 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 VWA5B2Q8N398 1253 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 MDS2Q8NDY4 140 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 NUBPLQ8TB37 319 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 TUBGCP3Q96CW5 907 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 FCRL1Q96LA6 429 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 ZNF681Q96N22 645 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 SORT1Q99523 831 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 C20orf27Q9GZN8 174 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 ACBD3Q9H3P7 528 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 LIN28AQ9H9Z2 209 aaKnown RBP16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 SLC35C2Q9NQQ7 365 aa16.2■□□□□ 0.18
SMARCAL1-209ENST00000444508 SPENQ96T58 3664 aaKnown RBP16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 RP1L1Q8IWN7 2480 aaPredicted RBP16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 NBASA2RRP1 2371 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 ATP6AP2A0A1C7CYW4 349 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 TMEM200CA6NKL6 621 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 ATP6AP2O75787 350 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 OR2J2O76002 312 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 SDC1P18827 310 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 TACR1P25103 407 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 SSTR4P31391 388 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 ASMTP46597 345 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 SLC37A1P57057 533 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 FUT7Q11130 342 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 ZNF468Q5VIY5 522 aaPredicted RBP16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 SPINK14Q6IE38 97 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 C16orf47Q6ZP98 133 aaPredicted RBP16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 ATCAYQ86WG3 371 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 TICAM1Q8IUC6 712 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 C9orf40Q8IXQ3 194 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 CCDC116Q8IYX3 515 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 TMEM178AQ8NBL3 297 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 OR7G1Q8NGA0 311 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 ASB15Q8WXK1 588 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 TMEM125Q96AQ2 219 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 SNRNP40Q96DI7 357 aaKnown RBP16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 C3orf30Q96M34 536 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 TSSK3Q96PN8 268 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 SIGLEC12Q96PQ1 595 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 BBS4Q96RK4 519 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 GAL3ST4Q96RP7 486 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 RASL10BQ96S79 203 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 MANSC1Q9H8J5 431 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 AGPAT4Q9NRZ5 378 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 THAP1Q9NVV9 213 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 GIMAP2Q9UG22 337 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 HAO1Q9UJM8 370 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 ERVK-11Q9UQG0 969 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 PCDHGB6Q9Y5F9 930 aa16.19■□□□□ 0.18
SMARCAL1-209ENST00000444508 A8MVJ9 347 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 SLC25A12O75746 678 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 NEURL1O76050 574 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 CT62P0C5K7 136 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 BCKDHAP12694 445 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 NTSP30990 170 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 MPIP34949 423 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 FOXK1P85037 733 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 DUSP2Q05923 314 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 MAP4K2Q12851 820 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 IGFBP7Q16270 282 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 MPEG1Q2M385 716 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 PRICKLE4Q2TBC4 344 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 C6orf136Q5SQH8 315 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 HLA-DQA1Q5Y7H0 255 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 FAM180AQ6UWF9 173 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 GPALPP1Q8IXQ4 340 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 FAM9CQ8IZT9 166 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 CYP4Z2PQ8N1L4 340 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 FNDC5Q8NAU1 212 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 ADCY4Q8NFM4 1077 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 SLC22A8Q8TCC7 542 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 MIB2Q96AX9 1013 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 EGLN2Q96KS0 407 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 WWTR1Q9GZV5 400 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 OR10A5Q9H207 317 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms