RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 CAB39Q9Y376 341 aaPredicted RBP6.11□□□□□ -1.43
HDAC6-210ENST00000441703 PCYT1BQ9Y5K3 369 aaPredicted RBP6.11□□□□□ -1.43
HDAC6-210ENST00000441703 PMF1-BGLAPU3KQ54 211 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 AKAP6Q13023 2319 aa6.11□□□□□ -1.43
HDAC6-210ENST00000441703 TRAV17A0A0B4J275 112 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 TLCD2A6NGC4 264 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 AGAP5A6NIR3 686 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 C2CD4BA6NLJ0 364 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 CLDN24A6NM45 220 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 SNTNA6NMZ2 147 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 INAFM1C9JVW0 142 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 LOC110117498-PIK3R3F6TDL0 507 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 UBXN8O00124 270 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 PROM1O43490 865 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 SLCO2B1O94956 709 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 SNAP29O95721 258 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 CLIC3O95833 236 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 POLBP06746 335 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 CAPN1P07384 714 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 YES1P07947 543 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 CD63P08962 238 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 SBK3P0C264 359 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 IL4RP24394 825 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 ELK4P28324 431 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 RORAP35398 523 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 GMPRP36959 345 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 SPAM1P38567 509 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 ETV6P41212 452 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 RPS5P46782 204 aaKnown RBP6.1□□□□□ -1.43
HDAC6-210ENST00000441703 YAP1P46937 504 aaKnown RBP6.1□□□□□ -1.43
HDAC6-210ENST00000441703 OR3A3P47888 321 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 MRPL19P49406 292 aaKnown RBP6.1□□□□□ -1.43
HDAC6-210ENST00000441703 RENBPP51606 427 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 SLC7A2P52569 658 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 EEFSECP57772 596 aaKnown RBP6.1□□□□□ -1.43
HDAC6-210ENST00000441703 MVKQ03426 396 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 FXNQ16595 210 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 ADPRMQ3LIE5 342 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 ATAD3CQ5T2N8 411 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 RBM20Q5T481 1227 aaKnown RBP6.1□□□□□ -1.43
HDAC6-210ENST00000441703 UBE2UQ5VVX9 321 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 LRRC66Q68CR7 880 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 DESI1Q6ICB0 168 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 FAM122CQ6P4D5 195 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 CCBE1Q6UXH8 406 aaPredicted RBP6.1□□□□□ -1.43
HDAC6-210ENST00000441703 CERS6Q6ZMG9 384 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 USP45Q70EL2 814 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 GDPD3Q7L5L3 318 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 PIWIL4Q7Z3Z4 852 aaKnown RBP6.1□□□□□ -1.43
HDAC6-210ENST00000441703 TSPAN33Q86UF1 283 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 SPPL2CQ8IUH8 684 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 GALNT12Q8IXK2 581 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 RIMKLAQ8IXN7 391 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 RAVER1Q8IY67 606 aaKnown RBP6.1□□□□□ -1.43
HDAC6-210ENST00000441703 OFCC1Q8IZS5 231 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 PYROXD2Q8N2H3 581 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 D2HGDHQ8N465 521 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 PSD4Q8NDX1 1056 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 GOT1L1Q8NHS2 421 aaPredicted RBP6.1□□□□□ -1.43
HDAC6-210ENST00000441703 SETD6Q8TBK2 473 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 MAGEE2Q8TD90 523 aaPredicted RBP6.1□□□□□ -1.43
HDAC6-210ENST00000441703 ADAMTS18Q8TE60 1221 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 GIMAP1Q8WWP7 306 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 RXFP2Q8WXD0 754 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 TMEM158Q8WZ71 300 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 FIG4Q92562 907 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 PIK3R3Q92569 461 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 PROX1Q92786 737 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 PEX13Q92968 403 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 ZNF501Q96CX3 271 aaPredicted RBP6.1□□□□□ -1.43
HDAC6-210ENST00000441703 SCRN2Q96FV2 425 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 CERS2Q96G23 380 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 ST6GAL2Q96JF0 529 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 QKIQ96PU8 341 aaKnown RBP eCLIP6.1□□□□□ -1.43
HDAC6-210ENST00000441703 TAAR6Q96RI8 345 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 NODALQ96S42 347 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 CD180Q99467 661 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 MAP3K3Q99759 626 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 DPH2Q9BQC3 489 aaPredicted RBP6.1□□□□□ -1.43
HDAC6-210ENST00000441703 TMEM246Q9BRR3 403 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 ZNF670Q9BS34 389 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 SLIRPQ9GZT3 109 aaKnown RBP6.1□□□□□ -1.43
HDAC6-210ENST00000441703 ABCG8Q9H221 673 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 SP110Q9HB58 689 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 EML4Q9HC35 981 aaKnown RBP6.1□□□□□ -1.43
HDAC6-210ENST00000441703 ACOXLQ9NUZ1 547 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.1□□□□□ -1.43
HDAC6-210ENST00000441703 ABI3Q9P2A4 366 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 ZMAT5Q9UDW3 170 aaKnown RBP6.1□□□□□ -1.43
HDAC6-210ENST00000441703 PCSK1NQ9UHG2 260 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 CD84Q9UIB8 345 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 NUP50Q9UKX7 468 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 AURKCQ9UQB9 309 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 PSAT1Q9Y617 370 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 ATRQ13535 2644 aa6.1□□□□□ -1.43
HDAC6-210ENST00000441703 PNMA8CA0A1B0GUJ8 204 aa6.09□□□□□ -1.43
HDAC6-210ENST00000441703 METTL15A6NJ78 407 aa6.09□□□□□ -1.43
HDAC6-210ENST00000441703 AP3B1O00203 1094 aa6.09□□□□□ -1.43
HDAC6-210ENST00000441703 NME4O00746 187 aa6.09□□□□□ -1.43
HDAC6-210ENST00000441703 ARPC2O15144 300 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms