RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 MSRB3Q8IXL7 192 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 DSELQ8IZU8 1212 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 KIF2BQ8N4N8 673 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 DPP10Q8N608 796 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 OR51Q1Q8NH59 317 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 DNAJB14Q8TBM8 379 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 NETO1Q8TDF5 533 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 EXOSC8Q96B26 276 aaKnown RBP6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 MIEF2Q96C03 454 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 ROPN1LQ96C74 230 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 LRRC58Q96CX6 371 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 MVB12AQ96EY5 273 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 CNRIP1Q96F85 164 aaPredicted RBP6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 PEX11GQ96HA9 241 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 ITCHQ96J02 903 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 ZNF681Q96N22 645 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 CCDC115Q96NT0 180 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 GBP5Q96PP8 586 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 CMKLR1Q99788 373 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 GPATCH1Q9BRR8 931 aaKnown RBP6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 SLC39A3Q9BRY0 314 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 BTBD10Q9BSF8 475 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 TRIM4Q9C037 500 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 STRADBQ9C0K7 418 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 PAIP1Q9H074 479 aaKnown RBP6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 C1orf21Q9H246 121 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 LRMDAQ9H2I8 198 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 RPF2Q9H7B2 306 aaKnown RBP6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 ACTR5Q9H9F9 607 aaPredicted RBP6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 IL1RL2Q9HB29 575 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 ZNF304Q9HCX3 659 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 SLAMF7Q9NQ25 335 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 SLC35C2Q9NQQ7 365 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 SLC6A13Q9NSD5 602 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 ATAD3AQ9NVI7 634 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 FAM120CQ9NX05 1096 aaKnown RBP6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 MS4A12Q9NXJ0 267 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 SLC39A1Q9NY26 324 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 SLC25A37Q9NYZ2 338 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 NDOR1Q9UHB4 597 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 BTNL2Q9UIR0 455 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 UTS2RQ9UKP6 389 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 CDC14AQ9UNH5 594 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 SRPK3Q9UPE1 567 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 CLCA2Q9UQC9 943 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 MAN2B2Q9Y2E5 1009 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 LOXL2Q9Y4K0 774 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 NEUROG3Q9Y4Z2 214 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 PCDHGA7Q9Y5G6 932 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 NCOR1O75376 2440 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 GON4LQ3T8J9 2241 aa6.61□□□□□ -1.35
LSM3P3-201ENST00000436601 USP34Q70CQ2 3546 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 A0A096LPI6 279 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 TRBV5-3A0A0A0MS03 114 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 A0A1W2PRB8 838 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 OR2W5A6NFC9 320 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 MYO1GB0I1T2 1018 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 RNASET2O00584 256 aaKnown RBP6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 SLC30A4O14863 429 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 GSC2O15499 205 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 TBX1O43435 398 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 JRKO75564 520 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 C6orf47O95873 294 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 ONECUT2O95948 504 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 NPPAP01160 153 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 C1QCP02747 245 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 GSNP06396 782 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 C8orf89P0DMQ9 161 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 RNH1P13489 461 aaKnown RBP6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 CEACAM1P13688 526 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 HOXC12P31275 282 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 TLX1P31314 330 aaPredicted RBP6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 RORAP35398 523 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 BUD31P41223 144 aaPredicted RBP6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 TRPC1P48995 793 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 RASSF2P50749 326 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 PSME3P61289 254 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 SKP1P63208 163 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 BTG2P78543 158 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 MXRA7P84157 204 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 ERV3-1Q14264 604 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 CAPRIN1Q14444 709 aaKnown RBP6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 CEBPEQ15744 281 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 TRMT5Q32P41 509 aaKnown RBP6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 GTDC1Q4AE62 458 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 C6orf10Q5SRN2 563 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 LRIF1Q5T3J3 769 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 OR52E8Q6IFG1 317 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 LCN10Q6JVE6 187 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 CYB5D1Q6P9G0 228 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 MED25Q71SY5 747 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 COX15Q7KZN9 410 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 RAB11FIP2Q7L804 512 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 MAMDC2Q7Z304 686 aaPredicted RBP6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 ZNF551Q7Z340 670 aaPredicted RBP6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 DHDDSQ86SQ9 333 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 OR4N5Q8IXE1 308 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 DEFB107AQ8IZN7 70 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 PGAM4Q8N0Y7 254 aa6.6□□□□□ -1.35
LSM3P3-201ENST00000436601 NATD1Q8N6N6 113 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms