RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ZNF619Q8N2I2 560 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 SLC37A3Q8NCC5 494 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 GALNT6Q8NCL4 622 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 UPRTQ96BW1 309 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 RBM24Q9BX46 236 aaKnown RBP10.72□□□□□ -0.69
SCN4A-201ENST00000435607 ETAA1Q9NY74 926 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 OR6C70A6NIJ9 312 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 DLGAP1O14490 977 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 CDRT1O95170 752 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 LCATP04180 440 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 RPS3P23396 243 aaKnown RBP eCLIP10.72□□□□□ -0.69
SCN4A-201ENST00000435607 SLC6A8P48029 635 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 CXCL12P48061 93 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 STK19P49842 368 aaPredicted RBP10.72□□□□□ -0.69
SCN4A-201ENST00000435607 RAB15P59190 212 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 C1orf61Q13536 156 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 SH3RF1Q7Z6J0 888 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 C12orf45Q8N5I9 185 aaPredicted RBP10.72□□□□□ -0.69
SCN4A-201ENST00000435607 GOLM1Q8NBJ4 401 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 OR8K3Q8NH51 312 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 RNF128Q8TEB7 428 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 ADAMTS10Q9H324 1103 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 MST1RQ04912 1400 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 PRLP01236 227 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 PTGS2P35354 604 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 LBX1P52954 281 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 DYRK1AQ13627 763 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 RUNX3Q13761 415 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 MPPED2Q15777 294 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 TSTQ16762 297 aaKnown RBP10.72□□□□□ -0.69
SCN4A-201ENST00000435607 KCTD19Q17RG1 926 aaPredicted RBP10.72□□□□□ -0.69
SCN4A-201ENST00000435607 NAPRTQ6XQN6 538 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 OR5H2Q8NGV7 314 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 OR2T4Q8NH00 348 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 TBC1D20Q96BZ9 403 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 PWWP2AQ96N64 755 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 SRPK3Q9UPE1 567 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 GXYLT2A0PJZ3 443 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 LEFTY1O75610 366 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 SOX2P48431 317 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 DAP3P51398 398 aaKnown RBP10.72□□□□□ -0.69
SCN4A-201ENST00000435607 GRB7Q14451 532 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 SHFQ7M4L6 423 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 TRIB3Q96RU7 358 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 FETUBQ9UGM5 382 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 CAMK2AQ9UQM7 478 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 KIF1AQ12756 1690 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 PDLIM1O00151 329 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 SNCGO76070 127 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 PROS1P07225 676 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 TNFRSF4P43489 277 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 AKR1C8PQ5T2L2 129 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 OR52B2Q96RD2 323 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 MKS1Q9NXB0 559 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 SH2D7A6NKC9 451 aaPredicted RBP10.71□□□□□ -0.69
SCN4A-201ENST00000435607 DRD2P14416 443 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 CAPN3P20807 821 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 MSR1P21757 451 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 CD9P21926 228 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 LGALS4P56470 323 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 ZNF423Q2M1K9 1284 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 COL28A1Q2UY09 1125 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 C3orf38Q5JPI3 329 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 FBXO46Q6PJ61 603 aaPredicted RBP10.71□□□□□ -0.69
SCN4A-201ENST00000435607 PXKQ7Z7A4 578 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 CCDC32Q9BV29 185 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 NKX2-4Q9H2Z4 354 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 RPF2Q9H7B2 306 aaKnown RBP10.71□□□□□ -0.69
SCN4A-201ENST00000435607 ZNF355PQ9NSJ1 428 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.71□□□□□ -0.69
SCN4A-201ENST00000435607 LOC100130705A0A1B0GUX0 176 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 SMAD9O15198 467 aaKnown RBP10.71□□□□□ -0.69
SCN4A-201ENST00000435607 PRPH2P23942 346 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 THBS3P49746 956 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 RGS6P49758 472 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 CST6Q15828 149 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 SLC27A4Q6P1M0 643 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 OR4K15Q8NH41 348 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 BADQ92934 168 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 GCM1Q9NP62 436 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 TMEM248Q9NWD8 314 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 KLHL42Q9P2K6 505 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 PPRC1Q5VV67 1664 aaKnown RBP10.71□□□□□ -0.69
SCN4A-201ENST00000435607 LCHNA4D1U4 455 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 DIO3P55073 304 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 CYBRD1Q53TN4 286 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 JPH3Q8WXH2 748 aaPredicted RBP10.71□□□□□ -0.69
SCN4A-201ENST00000435607 FZD8Q9H461 694 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 TAS2R8Q9NYW2 309 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 COQ3Q9NZJ6 369 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 TVP23AA6NH52 213 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 CLCA1A8K7I4 914 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 HTR2AP28223 471 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 KCNQ1P51787 676 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 ZNF136P52737 540 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 PON2Q15165 354 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 ANKDD1AQ495B1 522 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 UBE2UQ5VVX9 321 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 UGT2A3Q6UWM9 527 aa10.71□□□□□ -0.69
SCN4A-201ENST00000435607 OR4F6Q8NGB9 312 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms