RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 OR51E2Q9H255 320 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 RHBGQ9H310 441 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 NMNAT1Q9HAN9 279 aaPredicted RBP8.26□□□□□ -1.09
GABPB1-205ENST00000429662 SLC25A19Q9HC21 320 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 ISYNA1Q9NPH2 558 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 SPHK2Q9NRA0 654 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 TMEM184CQ9NVA4 438 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 RLIMQ9NVW2 624 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 EHD3Q9NZN3 535 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 ADAM29Q9UKF5 820 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 RAB23Q9ULC3 237 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 MAP4K5Q9Y4K4 846 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 PCDHGB2Q9Y5G2 931 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 CFAP20Q9Y6A4 193 aaKnown RBP8.26□□□□□ -1.09
GABPB1-205ENST00000429662 CFAP46Q8IYW2 2715 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 PLXNB3Q9ULL4 1909 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 DOCK6Q96HP0 2047 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 PRAMEF33A0A0G2JMD5 474 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 TMEM202A6NGA9 273 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 PCDH17O14917 1159 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 PRAMEF10O60809 474 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 LILRB5O75023 590 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 TGFB1P01137 390 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 GASTP01350 101 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 OPN1SWP03999 348 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 PRNPP04156 253 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 KRT8P05787 483 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 KLK1P06870 262 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 H1F0P07305 194 aaKnown RBP8.25□□□□□ -1.09
GABPB1-205ENST00000429662 HSMCR30P0CW71 290 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 TYRP14679 529 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 DDCP20711 480 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 CNR2P34972 360 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 OR1E2P47887 323 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 ST8SIA6P61647 398 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 TAP2Q03519 686 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 DPTQ07507 201 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 GNA13Q14344 377 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 MED22Q15528 200 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 SF1Q15637 639 aaKnown RBP8.25□□□□□ -1.09
GABPB1-205ENST00000429662 CCSMST1Q4G0I0 132 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 C12orf73Q69YU5 71 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 KLHL17Q6TDP4 642 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 CCBE1Q6UXH8 406 aaPredicted RBP8.25□□□□□ -1.09
GABPB1-205ENST00000429662 TMIGD1Q6UXZ0 262 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 ZNF852Q6ZMS4 543 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 Q6ZPB1 254 aaPredicted RBP8.25□□□□□ -1.09
GABPB1-205ENST00000429662 DSG4Q86SJ6 1040 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 SLC9B2Q86UD5 537 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 ATCAYQ86WG3 371 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 HEATR4Q86WZ0 1026 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 CFAP206Q8IYR0 622 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 C12orf76Q8N812 135 aaPredicted RBP8.25□□□□□ -1.09
GABPB1-205ENST00000429662 OR9Q2Q8NGE9 314 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 MRGPRX3Q96LB0 322 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 ZNF354BQ96LW1 612 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 COQ10AQ96MF6 247 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 NECTIN4Q96NY8 510 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 USB1Q9BQ65 265 aaKnown RBP8.25□□□□□ -1.09
GABPB1-205ENST00000429662 AIF1LQ9BQI0 150 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 CENPOQ9BU64 300 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 TRIM39Q9HCM9 518 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 ACSS1Q9NUB1 689 aaPredicted RBP8.25□□□□□ -1.09
GABPB1-205ENST00000429662 TDP1Q9NUW8 608 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 STUB1Q9UNE7 303 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 SSR3Q9UNL2 185 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 DNMT3AQ9Y6K1 912 aaPredicted RBP8.25□□□□□ -1.09
GABPB1-205ENST00000429662 COL4A2P08572 1712 aa8.25□□□□□ -1.09
GABPB1-205ENST00000429662 RALGAPA1Q6GYQ0 2036 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 IQCMA0A1B0GVH7 501 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 PRAMEF25A6NGN4 478 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 ANKDD1BA6NHY2 528 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 TTC36A6NLP5 189 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 KMOO15229 486 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 CAPN5O15484 640 aaPredicted RBP8.24□□□□□ -1.09
GABPB1-205ENST00000429662 PDPK1O15530 556 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 WIPF1O43516 503 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 MFN2O95140 757 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 LGI1O95970 557 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 DCNP07585 359 aaKnown RBP8.24□□□□□ -1.09
GABPB1-205ENST00000429662 IL3P08700 152 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 ACADMP11310 421 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 GSTM3P21266 225 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 ITGB7P26010 798 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 CASP3P42574 277 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 FRKP42685 505 aaPredicted RBP8.24□□□□□ -1.09
GABPB1-205ENST00000429662 RPS5P46782 204 aaKnown RBP8.24□□□□□ -1.09
GABPB1-205ENST00000429662 SEPHS1P49903 392 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 XKP51811 444 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 NUDT6P53370 316 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 MLLT11Q13015 90 aaPredicted RBP8.24□□□□□ -1.09
GABPB1-205ENST00000429662 SLC13A2Q13183 592 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 TDGQ13569 410 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 SPHARQ15513 63 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 MPEG1Q2M385 716 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 KLHL22Q53GT1 634 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 PRAMEF14Q5SWL7 426 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 MFSD4BQ5TF39 518 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 AGAP6Q5VW22 663 aa8.24□□□□□ -1.09
GABPB1-205ENST00000429662 PRAMEF13Q5VWM6 474 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms