RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 TMEM109Q9BVC6 243 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 CENPHQ9H3R5 247 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 CXorf21Q9HAI6 301 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 SEC14L3Q9UDX4 400 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 NPIPA1Q9UND3 350 aa13.77□□□□□ -0.21
RTN4-210ENST00000427710 POLR3HQ9Y535 204 aaPredicted RBP13.77□□□□□ -0.21
RTN4-210ENST00000427710 MED12Q93074 2177 aa13.76□□□□□ -0.21
RTN4-210ENST00000427710 C1orf226A1L170 272 aa13.76□□□□□ -0.21
RTN4-210ENST00000427710 CCDC151A5D8V7 595 aa13.76□□□□□ -0.21
RTN4-210ENST00000427710 ASPDHA6ND91 283 aa13.76□□□□□ -0.21
RTN4-210ENST00000427710 TMEM233B4DJY2 109 aa13.76□□□□□ -0.21
RTN4-210ENST00000427710 PEX1O43933 1283 aa13.76□□□□□ -0.21
RTN4-210ENST00000427710 GUCY1B2O75343 617 aa13.76□□□□□ -0.21
RTN4-210ENST00000427710 NADKO95544 446 aaPredicted RBP13.76□□□□□ -0.21
RTN4-210ENST00000427710 PORP16435 677 aaPredicted RBP13.76□□□□□ -0.21
RTN4-210ENST00000427710 TIA1P31483 386 aaKnown RBP eCLIP13.76□□□□□ -0.218e-7■■□□□ 11.4
RTN4-210ENST00000427710 SLC37A1P57057 533 aa13.76□□□□□ -0.21
RTN4-210ENST00000427710 PRSS53Q2L4Q9 553 aa13.76□□□□□ -0.21
RTN4-210ENST00000427710 PIGGQ5H8A4 983 aa13.76□□□□□ -0.21
RTN4-210ENST00000427710 C1QL3Q5VWW1 255 aa13.76□□□□□ -0.21
RTN4-210ENST00000427710 TMEM64Q6YI46 380 aa13.76□□□□□ -0.21
RTN4-210ENST00000427710 FAM98AQ8NCA5 519 aaKnown RBP13.76□□□□□ -0.21
RTN4-210ENST00000427710 SIMC1Q8NDZ2 872 aa13.76□□□□□ -0.21
RTN4-210ENST00000427710 OR5L2Q8NGL0 311 aa13.76□□□□□ -0.21
RTN4-210ENST00000427710 OR8K3Q8NH51 312 aa13.76□□□□□ -0.21
RTN4-210ENST00000427710 EXOSC8Q96B26 276 aaKnown RBP13.76□□□□□ -0.21
RTN4-210ENST00000427710 BRINP2Q9C0B6 783 aa13.76□□□□□ -0.21
RTN4-210ENST00000427710 PFDN4Q9NQP4 134 aa13.76□□□□□ -0.21
RTN4-210ENST00000427710 DEPPQ9NTK1 212 aa13.76□□□□□ -0.21
RTN4-210ENST00000427710 SH3BGRL2Q9UJC5 107 aa13.76□□□□□ -0.21
RTN4-210ENST00000427710 KLF13Q9Y2Y9 288 aaPredicted RBP13.76□□□□□ -0.21
RTN4-210ENST00000427710 CACNA1DQ01668 2161 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 SERTM1A2A2V5 107 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 AZIN1O14977 448 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 RGS16O15492 202 aaPredicted RBP13.75□□□□□ -0.21
RTN4-210ENST00000427710 LRATO95237 230 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 UROSP10746 265 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 NR0B1P51843 470 aaKnown RBP13.75□□□□□ -0.21
RTN4-210ENST00000427710 TRA2BP62995 288 aaKnown RBP13.75□□□□□ -0.21
RTN4-210ENST00000427710 HSF1Q00613 529 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 EXOSC7Q15024 291 aaKnown RBP13.75□□□□□ -0.21
RTN4-210ENST00000427710 SPIN4Q56A73 249 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 CEP85LQ5SZL2 805 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 HIST2H2BCQ6DN03 193 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 LYPD8Q6UX82 237 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 SLC29A4Q7RTT9 530 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 GALNT12Q8IXK2 581 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 PSD4Q8NDX1 1056 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 C7orf57Q8NEG2 295 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 AGR3Q8TD06 166 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 SSC4DQ8WTU2 575 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 CNRIP1Q96F85 164 aaPredicted RBP13.75□□□□□ -0.21
RTN4-210ENST00000427710 PKNOX2Q96KN3 472 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 FAIM2Q9BWQ8 316 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 WWTR1Q9GZV5 400 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 TUBB1Q9H4B7 451 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 TIMMDC1Q9NPL8 285 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 UTS2RQ9UKP6 389 aa13.75□□□□□ -0.21
RTN4-210ENST00000427710 PCNX3Q9H6A9 2034 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 DOPEY1Q5JWR5 2465 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 CACNA1CQ13936 2221 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 A1L4Q6 167 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 WDR91A4D1P6 747 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 CDK2AP1O14519 115 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 LRRTM2O43300 516 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 TYROBPO43914 113 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 NME6O75414 186 aaPredicted RBP13.74□□□□□ -0.21
RTN4-210ENST00000427710 ANXA4P09525 319 aaPredicted RBP13.74□□□□□ -0.21
RTN4-210ENST00000427710 CCL3P10147 92 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 S1PR1P21453 382 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 ARRB2P32121 409 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 GALNSP34059 522 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 SOX18P35713 384 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 NAA20P61599 178 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 C2orf80Q0P641 193 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 MGAT2Q10469 447 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 DUSP8Q13202 625 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 EBPQ15125 230 aaKnown RBP13.74□□□□□ -0.21
RTN4-210ENST00000427710 MPEG1Q2M385 716 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 PRICKLE4Q2TBC4 344 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 C6orf163Q5TEZ5 329 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 EXOC3L1Q86VI1 746 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 FJX1Q86VR8 437 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 SIAH3Q8IW03 269 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 CCDC116Q8IYX3 515 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 PRR22Q8IZ63 422 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 ZNF615Q8N8J6 731 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 OR5M3Q8NGP4 307 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 OR2T11Q8NH01 316 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 NUBPLQ8TB37 319 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 C11orf24Q96F05 449 aaPredicted RBP13.74□□□□□ -0.21
RTN4-210ENST00000427710 GPR137Q96N19 417 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 ZNF681Q96N22 645 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 OR10A5Q9H207 317 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 ANKRA2Q9H9E1 313 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 MAT2BQ9NZL9 334 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 BCAP29Q9UHQ4 241 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 SLC5A6Q9Y289 635 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 DTX4Q9Y2E6 619 aa13.74□□□□□ -0.21
RTN4-210ENST00000427710 CCL27Q9Y4X3 112 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms