RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 SNX15Q9NRS6 342 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 CLCF1Q9UBD9 225 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 ERVK-19Q9WJR5 959 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 WIF1Q9Y5W5 379 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 A8MV72 311 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-206ENST00000426196 TBX6O95947 436 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-206ENST00000426196 CRHP06850 196 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 LOXP28300 417 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-206ENST00000426196 PTPN6P29350 595 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 CCKARP32238 428 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 VPS41P49754 854 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 HNMTP50135 292 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 PPP1R3AQ16821 1122 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 KRTAP24-1Q3LI83 254 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 KBTBD12Q3ZCT8 623 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 ANKRD22Q5VYY1 191 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 PLXDC2Q6UX71 529 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 TMEM64Q6YI46 380 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 ZNF793Q6ZN11 406 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 ZNF550Q7Z398 422 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 CNEP1R1Q8N9A8 125 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 ACOT4Q8N9L9 421 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 BBOF1Q8ND07 529 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 OR1J4Q8NGS1 313 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 ANKRD7Q92527 254 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 ZBED6CLQ96FA7 236 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-206ENST00000426196 SERPINB12Q96P63 405 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 F2RL3Q96RI0 385 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 PELOQ9BRX2 385 aaKnown RBP12.88□□□□□ -0.35
HDAC6-206ENST00000426196 TBCDQ9BTW9 1192 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 PSD3Q9NYI0 1048 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 MAPRE3Q9UPY8 281 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 ZKSCAN5Q9Y2L8 839 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 PRR14LQ5THK1 2151 aa12.88□□□□□ -0.35
HDAC6-206ENST00000426196 C2orf92A0A1B0GVN3 265 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 C16orf97H3BN30 126 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 OR10H2O60403 315 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 CCDC175P0C221 793 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 ALOX15P16050 662 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-206ENST00000426196 ATP5A1P25705 553 aaKnown RBP12.87□□□□□ -0.35
HDAC6-206ENST00000426196 CASP3P42574 277 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 KCNJ1P48048 391 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 KCNJ5P48544 419 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 NRG3P56975 720 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 SLC37A1P57057 533 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 PCDH1Q08174 1060 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 ZNF267Q14586 743 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-206ENST00000426196 SETDB1Q15047 1291 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 TRIP13Q15645 432 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-206ENST00000426196 SPRED3Q2MJR0 410 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 BEX5Q5H9J7 111 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 HLA-DQA1Q5Y7H0 255 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 ANGPTL8Q6UXH0 198 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 ZNF704Q6ZNC4 412 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-206ENST00000426196 DGAT2L6Q6ZPD8 337 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 P4HA3Q7Z4N8 544 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 VN1R5Q7Z5H4 357 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 ST13P4Q8IZP2 240 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-206ENST00000426196 DOK4Q8TEW6 326 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 CAVIN3Q969G5 261 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 KRT12Q99456 494 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 CAPS2Q9BXY5 557 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 RPF2Q9H7B2 306 aaKnown RBP12.87□□□□□ -0.35
HDAC6-206ENST00000426196 METTL7AQ9H8H3 244 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 ELOVL5Q9NYP7 299 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 CDC42EP3Q9UKI2 254 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 CAPN6Q9Y6Q1 641 aa12.87□□□□□ -0.35
HDAC6-206ENST00000426196 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-206ENST00000426196 GOLGA8MH3BSY2 632 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 PLOD2O00469 737 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 WIPF1O43516 503 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 KRT15P19012 456 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 HIST1H1TP22492 207 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-206ENST00000426196 GABRB3P28472 473 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 IDUAP35475 653 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 ANP32AP39687 249 aaKnown RBP12.86□□□□□ -0.35
HDAC6-206ENST00000426196 SSR2P43308 183 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 CDKL1Q00532 357 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 AP5B1Q2VPB7 878 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 OR2A2Q6IF42 318 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 ADNP2Q6IQ32 1131 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 VWA1Q6PCB0 445 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 RAD9BQ6WBX8 426 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 FRA10AC1Q70Z53 315 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 IFNEQ86WN2 208 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 TRIM42Q8IWZ5 723 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 ZNF611Q8N823 705 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 MCUQ8NE86 351 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 OR14L1PQ8NHC6 308 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 MAIP1Q8WWC4 291 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 TANKQ92844 425 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 TP53INP1Q96A56 240 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 STARD4Q96DR4 205 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 TRMT61AQ96FX7 289 aaKnown RBP12.86□□□□□ -0.35
HDAC6-206ENST00000426196 PGM2Q96G03 612 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 PDLIM5Q96HC4 596 aaKnown RBP12.86□□□□□ -0.35
HDAC6-206ENST00000426196 VPS39Q96JC1 886 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 C19orf24Q9BVV8 132 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 EHD1Q9H4M9 534 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 ACTR8Q9H981 624 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms