RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 TMEM19Q96HH6 336 aa16.31■□□□□ 0.2
FN1-208ENST00000426059 BDH2Q9BUT1 245 aa16.31■□□□□ 0.2
FN1-208ENST00000426059 SYNDIG1Q9H7V2 258 aa16.31■□□□□ 0.2
FN1-208ENST00000426059 RAB23Q9ULC3 237 aa16.31■□□□□ 0.2
FN1-208ENST00000426059 LRCH1Q9Y2L9 728 aa16.31■□□□□ 0.2
FN1-208ENST00000426059 SPACA6W5XKT8 324 aa16.31■□□□□ 0.2
FN1-208ENST00000426059 GPR179Q6PRD1 2367 aa16.31■□□□□ 0.2
FN1-208ENST00000426059 CFAP54Q96N23 3096 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 GNGT2O14610 69 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 EI24O14681 340 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 DEAF1O75398 565 aaPredicted RBP16.3■□□□□ 0.2
FN1-208ENST00000426059 CPMP14384 443 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 UQCRBP14927 111 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 SOX18P35713 384 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 OR1E2P47887 323 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 HSD11B2P80365 405 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 RBBP4Q09028 425 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 NR1D2Q14995 579 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 NUP43Q8NFH3 380 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 ZNF285Q96NJ3 590 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 CD180Q99467 661 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 MAGIXQ9H6Y5 334 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 ZSCAN32Q9NX65 697 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 SUV39H1O43463 412 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 TFPTP0C1Z6 253 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 RAB38P57729 211 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 NR0B2Q15466 257 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.3■□□□□ 0.24e-21■□□□□ 10.7
FN1-208ENST00000426059 TRMT12Q53H54 448 aaKnown RBP16.3■□□□□ 0.2
FN1-208ENST00000426059 TLDC1Q6P9B6 456 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 ISLR2Q6UXK2 745 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 ZNF574Q6ZN55 896 aaPredicted RBP16.3■□□□□ 0.2
FN1-208ENST00000426059 TMEM179BQ7Z7N9 219 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 RCBTB1Q8NDN9 531 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 VCXQ9H320 206 aa16.3■□□□□ 0.2
FN1-208ENST00000426059 EMC8O43402 210 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 OR2B3O76000 313 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 FHP07954 510 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 PORP16435 677 aaPredicted RBP16.29■□□□□ 0.2
FN1-208ENST00000426059 ALAS2P22557 587 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 AVPR2P30518 371 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 KCNJ10P78508 379 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 ANKRD34AQ69YU3 496 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 REEP3Q6NUK4 255 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 PPP4R4Q6NUP7 873 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 ZBTB44Q8NCP5 570 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 RSPO3Q9BXY4 272 aaPredicted RBP16.29■□□□□ 0.2
FN1-208ENST00000426059 ADPRHL2Q9NX46 363 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 VNN3Q9NY84 501 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 DHCR7Q9UBM7 475 aaKnown RBP16.29■□□□□ 0.2
FN1-208ENST00000426059 PCDHGB5Q9Y5G0 923 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 AP4B1Q9Y6B7 739 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 MN1Q10571 1320 aaPredicted RBP16.29■□□□□ 0.2
FN1-208ENST00000426059 A0A1W2PQM1 296 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 C5orf58C9J3I9 102 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 JRKO75564 520 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 PCBP3P57721 371 aaKnown RBP16.29■□□□□ 0.2
FN1-208ENST00000426059 SELENOWP63302 87 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 CCL7P80098 99 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 GK3PQ14409 553 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 MYBPC3Q14896 1274 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 LAPTM4AQ15012 233 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 NDUFA9Q16795 377 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 TMEM64Q6YI46 380 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 TTLL10Q6ZVT0 673 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 OR1L3Q8NH93 324 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 SPPL2AQ8TCT8 520 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 MAGEE2Q8TD90 523 aaPredicted RBP16.29■□□□□ 0.2
FN1-208ENST00000426059 ANKRD9Q96BM1 317 aaPredicted RBP16.29■□□□□ 0.2
FN1-208ENST00000426059 IL1RAPQ9NPH3 570 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 DDX18Q9NVP1 670 aaKnown RBP16.29■□□□□ 0.2
FN1-208ENST00000426059 DNAJB9Q9UBS3 223 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 SLC6A14Q9UN76 642 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 ANGPT4Q9Y264 503 aa16.29■□□□□ 0.2
FN1-208ENST00000426059 ASCC3Q8N3C0 2202 aaKnown RBP16.28■□□□□ 0.2
FN1-208ENST00000426059 ARHGAP33O14559 1287 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 SLC28A2O43868 658 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 PGM3O95394 542 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 GPR75O95800 540 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 SEMG1P04279 462 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 BTG2P78543 158 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 PRR5P85299 388 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 DGAT2L6Q6ZPD8 337 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.28■□□□□ 0.2
FN1-208ENST00000426059 DOHHQ9BU89 302 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 C9orf16Q9BUW7 83 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 NPLQ9BXD5 320 aaPredicted RBP16.28■□□□□ 0.2
FN1-208ENST00000426059 RUBCNLQ9H714 662 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 C3orf14Q9HBI5 128 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 A4GALTQ9NPC4 353 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 NDOR1Q9UHB4 597 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 CNOT11Q9UKZ1 510 aaKnown RBP16.28■□□□□ 0.2
FN1-208ENST00000426059 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 PRAMEF25A6NGN4 478 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 H3BMH7 237 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 TGFBR3LH3BV60 316 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 DLGAP1O14490 977 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 PRSS23O95084 383 aa16.28■□□□□ 0.2
FN1-208ENST00000426059 RPLP0P05388 317 aaKnown RBP16.28■□□□□ 0.2
FN1-208ENST00000426059 FABP3P05413 133 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms