RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 GLS2Q9UI32 602 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 TRMT6Q9UJA5 497 aaKnown RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 CPSF3Q9UKF6 684 aaKnown RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 KCNJ14Q9UNX9 436 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 PRELID3BQ9Y3B1 194 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 RNF11Q9Y3C5 154 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 LYVE1Q9Y5Y7 322 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 CACNG2Q9Y698 323 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ATRNO75882 1429 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 DCCP43146 1447 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 LAMA4Q16363 1823 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 NWD1Q149M9 1564 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 RGPD1P0DJD0 1748 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 COL22A1Q8NFW1 1626 aaPredicted RBP3.15□□□□□ -1.9
SDCBPP3-201ENST00000419629 TRAV6A0A075B6T7 132 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 C1orf226A1L170 272 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 EFCAB10A6NFE3 127 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 SDR42E2A6NKP2 422 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 A6NL46 340 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 A8MU76 341 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 A8MX80 341 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 MYO1GB0I1T2 1018 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 ZNF487B1APH4 448 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 EEF2KO00418 725 aaKnown RBP3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 DNALI1O14645 258 aaPredicted RBP3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 ZBTB5O15062 677 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 HDAC3O15379 428 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 ZNHIT1O43257 154 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 SSX5O60225 188 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 DFNA5O60443 496 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 PTP4A3O75365 173 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 TRIM3O75382 744 aaPredicted RBP3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 UPK1BO75841 260 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 NOL4O94818 638 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 CDK14O94921 469 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 SNAP29O95721 258 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 TRIM49P0CI25 452 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 TRIM49CP0CI26 452 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 SLC2A3P11169 496 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 ACADMP11310 421 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 SFTPCP11686 197 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 IL7P13232 177 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 LAMP2P13473 410 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 MYOD1P15172 320 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 CD53P19397 219 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 RAB3AP20336 220 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 NR2F2P24468 414 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 UGT2B10P36537 528 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 HTR2BP41595 481 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 NPY2RP49146 381 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 STARP49675 285 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 VEGFCP49767 419 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 GDI2P50395 445 aaKnown RBP3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 HLCSP50747 726 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 FUT6P51993 359 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 NDST1P52848 882 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 NKX2-5P52952 324 aaPredicted RBP3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 PPP5CP53041 499 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 GALCP54803 685 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 MFAP3P55082 362 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 SNX16P57768 344 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 TAS2R40P59535 323 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 EIF3EP60228 445 aaKnown RBP3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 HAND2P61296 217 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 ERVK11-1P61568 191 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 RPP38P78345 283 aaKnown RBP3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 CDKL1Q00532 357 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 RFTN1Q14699 578 aaPredicted RBP3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 MORF4L2Q15014 288 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 ANGPT1Q15389 498 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 MED22Q15528 200 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 PKN2Q16513 984 aaKnown RBP3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 ZNF805Q5CZA5 627 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 ATAD3CQ5T2N8 411 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 LGSNQ5TDP6 509 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 C18orf63Q68DL7 685 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 KRT39Q6A163 491 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 ANGPTL8Q6UXH0 198 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 GLDNQ6ZMI3 551 aaPredicted RBP3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 ASB18Q6ZVZ8 466 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 KCTD8Q6ZWB6 473 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 PRSS48Q7RTY5 328 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 ZNF571Q7Z3V5 609 aaPredicted RBP3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 SLC9B2Q86UD5 537 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 SLC22A16Q86VW1 577 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 TBC1D10CQ8IV04 446 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 ARID3BQ8IVW6 561 aaPredicted RBP3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 RCOR2Q8IZ40 523 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 DEFB107AQ8IZN7 70 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 SFRP1Q8N474 314 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 ANKFN1Q8N957 763 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 Q8N9G6 341 aaPredicted RBP3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 BANPQ8N9N5 519 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 POC5Q8NA72 575 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 LEMD2Q8NC56 503 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 OR8K5Q8NH50 307 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 BBS10Q8TAM1 723 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 SETD6Q8TBK2 473 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 TCP10LQ8TDR4 215 aa3.15□□□□□ -1.91
SDCBPP3-201ENST00000419629 PHF10Q8WUB8 498 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms