RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 RAB8AP61006 207 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 PRKCDQ05655 676 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 ZNF77Q15935 545 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 TIMM50Q3ZCQ8 353 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 TMC5Q6UXY8 1006 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 LHFPL3Q86UP9 236 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 GLCCI1Q86VQ1 547 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 AMZ2Q86W34 360 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 OR4K5Q8NGD3 323 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 OR6T1Q8NGN1 323 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 PDXPQ96GD0 296 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 C16orf58Q96GQ5 468 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 TMEM80Q96HE8 168 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 PLA2G12AQ9BZM1 189 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 CCDC59Q9P031 241 aaKnown RBP11.26□□□□□ -0.61
LIMK1-202ENST00000418310 TBC1D14Q9P2M4 693 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 REV1Q9UBZ9 1251 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 TBC1D24Q9ULP9 559 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 TCF20Q9UGU0 1960 aaKnown RBP11.26□□□□□ -0.61
LIMK1-202ENST00000418310 A0A1W2PQ09 198 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 DYRK3O43781 588 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 FKTNO75072 461 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 PTTG1O95997 202 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 ADRB3P13945 408 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 MMP11P24347 488 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 BMPR1AP36894 532 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 ETV5P41161 510 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 LIMS1P48059 325 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 ETV1P50549 477 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 RACK1P63244 317 aaKnown RBP11.26□□□□□ -0.61
LIMK1-202ENST00000418310 EIF4HQ15056 248 aaKnown RBP11.26□□□□□ -0.61
LIMK1-202ENST00000418310 CCDC92Q53HC0 331 aaPredicted RBP11.26□□□□□ -0.61
LIMK1-202ENST00000418310 ZNF770Q6IQ21 691 aaPredicted RBP11.26□□□□□ -0.61
LIMK1-202ENST00000418310 LRRC56Q8IYG6 542 aaPredicted RBP11.26□□□□□ -0.61
LIMK1-202ENST00000418310 NLGN4YQ8NFZ3 816 aaPredicted RBP11.26□□□□□ -0.61
LIMK1-202ENST00000418310 OR8K5Q8NH50 307 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 COL26A1Q96A83 441 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 ZG16BQ96DA0 208 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 CXorf40BQ96DE9 158 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 SLC35G5Q96KT7 338 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 BBS4Q96RK4 519 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 KLHL31Q9H511 634 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 COMMD3Q9UBI1 195 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 PLEKHM1Q9Y4G2 1056 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 IRAK3Q9Y616 596 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 KCNE3Q9Y6H6 103 aa11.26□□□□□ -0.61
LIMK1-202ENST00000418310 IGLON5A6NGN9 336 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 CPSF4LA6NMK7 179 aaKnown RBP11.25□□□□□ -0.61
LIMK1-202ENST00000418310 OR52A4PA6NMU1 304 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.25□□□□□ -0.61
LIMK1-202ENST00000418310 TMCC2O75069 709 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 NCR1O76036 304 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 TSPAN19P0C672 248 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 RPL3P39023 403 aaKnown RBP11.25□□□□□ -0.61
LIMK1-202ENST00000418310 ZNF33BQ06732 778 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 SLAMF1Q13291 335 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 KRT33BQ14525 404 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 POF1BQ8WVV4 589 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 ASB15Q8WXK1 588 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 NACC2Q96BF6 587 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 RSPRY1Q96DX4 576 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 DIRAS2Q96HU8 199 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 COQ10AQ96MF6 247 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 NECTIN4Q96NY8 510 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 FERD3LQ96RJ6 166 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 AIF1LQ9BQI0 150 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 HOXD1Q9GZZ0 328 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 AHSPQ9NZD4 102 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 MAPRE3Q9UPY8 281 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 TRPM6Q9BX84 2022 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 TRBV23OR9-2A0A075B6M9 112 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 TBC1D3BA6NDS4 549 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 SLITRK5O94991 958 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 CSTF2P33240 577 aaKnown RBP eCLIP11.25□□□□□ -0.61
LIMK1-202ENST00000418310 SDC2P34741 201 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 SOX18P35713 384 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 AVPR1BP47901 424 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 HNRNPFP52597 415 aaKnown RBP11.25□□□□□ -0.61
LIMK1-202ENST00000418310 TMEM107Q6UX40 140 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 ZER1Q7Z7L7 766 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 NLRP8Q86W28 1048 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 HOMEZQ8IX15 550 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 C9orf43Q8TAL5 461 aaPredicted RBP11.25□□□□□ -0.61
LIMK1-202ENST00000418310 CXorf40AQ8TE69 158 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 TXNDC15Q96J42 360 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 RAD9AQ99638 391 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 DPH7Q9BTV6 452 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 CDCA4Q9BXL8 241 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 ZNF717Q9BY31 904 aaPredicted RBP11.25□□□□□ -0.61
LIMK1-202ENST00000418310 TBC1D17Q9HA65 648 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 SIRT3Q9NTG7 399 aaPredicted RBP11.25□□□□□ -0.61
LIMK1-202ENST00000418310 CXXC1Q9P0U4 656 aaPredicted RBP11.25□□□□□ -0.61
LIMK1-202ENST00000418310 TBX21Q9UL17 535 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 SSR3Q9UNL2 185 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 KLK4Q9Y5K2 254 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 HEATR5BQ9P2D3 2071 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 E9PQ18 207 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 CAPN5O15484 640 aaPredicted RBP11.25□□□□□ -0.61
LIMK1-202ENST00000418310 NDUFS4O43181 175 aa11.25□□□□□ -0.61
LIMK1-202ENST00000418310 IDH3BO43837 385 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms