RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 HACD2Q6Y1H2 254 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 TMEM25Q86YD3 366 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 ELMOD2Q8IZ81 293 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 IGSF8Q969P0 613 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 TREX2Q9BQ50 279 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-205ENST00000418258 C16orf70Q9BSU1 422 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 SEC14L4Q9UDX3 406 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 C8BP07358 591 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 PRKACGP22612 351 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 TNFSF4P23510 183 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 FOXN2P32314 431 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 PSPHP78330 225 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 TMEM69Q5SWH9 247 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 SLC27A4Q6P1M0 643 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 SLC37A3Q8NCC5 494 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 OR8K5Q8NH50 307 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 CD300LFQ8TDQ1 290 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 BIRC7Q96CA5 298 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 TLCD1Q96CP7 247 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 LPAR4Q99677 370 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 TRBV2A0A0J9YWF9 115 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 GSTT2P0CG29 244 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 GLDCP23378 1020 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 DNAJB1P25685 340 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 APLNRP35414 380 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 RBMXP38159 391 aaKnown RBP10.72□□□□□ -0.69
PTCH1-205ENST00000418258 AFF1P51825 1210 aaKnown RBP10.72□□□□□ -0.69
PTCH1-205ENST00000418258 RING1Q06587 406 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 TUBB3Q13509 450 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 DEFB110Q30KQ9 67 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 PRR18Q8N4B5 295 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 OR5B2Q96R09 309 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 CRB3Q9BUF7 120 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 DIRAS3O95661 229 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 CER1O95813 267 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 ZNF43P17038 809 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 TIA1P31483 386 aaKnown RBP eCLIP10.72□□□□□ -0.69
PTCH1-205ENST00000418258 ACADVLP49748 655 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 SF3B4Q15427 424 aaKnown RBP eCLIP10.72□□□□□ -0.69
PTCH1-205ENST00000418258 TRAM1Q15629 374 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 LACTB2Q53H82 288 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-205ENST00000418258 TCTE1Q5JU00 501 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 AURKBQ96GD4 344 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-205ENST00000418258 ZNF559Q9BR84 538 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 URM1Q9BTM9 101 aaKnown RBP10.72□□□□□ -0.69
PTCH1-205ENST00000418258 ACTR6Q9GZN1 396 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 SCN11AQ9UI33 1791 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 LYSMD4Q5XG99 296 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 Q6ZSR6 202 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 ZNF440Q8IYI8 595 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 KCNK12Q9HB15 430 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 RGPD1P0DJD0 1748 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 POU3F4P49335 361 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 TUBA3CQ13748 450 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 RHEBQ15382 184 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 NXPE4Q6UWF7 544 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 ZNF517Q6ZMY9 492 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-205ENST00000418258 ADAMTS18Q8TE60 1221 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 CREB3L4Q8TEY5 395 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 RBM24Q9BX46 236 aaKnown RBP10.71□□□□□ -0.69
PTCH1-205ENST00000418258 BEX2Q9BXY8 128 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 BEX1Q9HBH7 125 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 POPDC3Q9HBV1 291 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 TUBA8Q9NY65 449 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-205ENST00000418258 ISPDA4D126 451 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 B8ZZF3 427 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 PROS1P07225 676 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 FPR1P21462 350 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 VEGFBP49765 207 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 DNAJB13P59910 316 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 RHDQ02161 417 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 DSC1Q08554 894 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 FIGLAQ6QHK4 219 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 SERINC5Q86VE9 423 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 PSD4Q8NDX1 1056 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 HUS1BQ8NHY5 278 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 SPTSSAQ969W0 71 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 SLC25A44Q96H78 314 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-205ENST00000418258 ZNF382Q96SR6 550 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 SLC10A3P09131 477 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 PNMTP11086 282 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 HNRNPA2B1P22626 353 aaKnown RBP10.71□□□□□ -0.69
PTCH1-205ENST00000418258 FRKP42685 505 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-205ENST00000418258 PXNP49023 591 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-205ENST00000418258 GINS1Q14691 196 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 EIF4HQ15056 248 aaKnown RBP10.71□□□□□ -0.69
PTCH1-205ENST00000418258 CNEP1R1Q8N9A8 125 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 STOML3Q8TAV4 291 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 EHD1Q9H4M9 534 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 SCML1Q9UN30 329 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 IL1RNP18510 177 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 GPR4P46093 362 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 ARSFP54793 590 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 COL9A3Q14050 684 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-205ENST00000418258 UGT8Q16880 541 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 DEFB133Q30KQ1 61 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 PLEKHN1Q494U1 663 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-205ENST00000418258 C6orf120Q7Z4R8 191 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 OR52E2Q8NGJ4 325 aa10.71□□□□□ -0.69
PTCH1-205ENST00000418258 SLC30A2Q9BRI3 323 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms