RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 HMX3A6NHT5 357 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 SAGE2PA6NJ88 616 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 ACOD1A6NK06 481 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 PP2D1A8MPX8 630 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 UBXN8O00124 270 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 PSMD12O00232 456 aaPredicted RBP5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 KPNA3O00505 521 aaPredicted RBP5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 TOR1BO14657 336 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 KIAA0391O15091 583 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 HOXA3O43365 443 aaPredicted RBP5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 CCNT2O60583 730 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 NOL3O60936 208 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 CLPXO76031 633 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 SLCO2B1O94956 709 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 ABHD16AO95870 558 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 PIGRP01833 764 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 MT-ND3P03897 115 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 OPN1MWP04001 364 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 CALB1P05937 261 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 OPN1MW2P0DN77 364 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 OPN1MW3P0DN78 364 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 CDH1P12830 882 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 POU2F1P14859 743 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 CD19P15391 556 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 RPA1P27694 616 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 DDOSTP39656 456 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 POU3F4P49335 361 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 MAN2A2P49641 1150 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 RAB13P51153 203 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 BMXP51813 675 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 TDGF1P3P51864 188 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 SUCLG1P53597 346 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 SLURP1P55000 103 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 TMBIM6P55061 237 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 MAZP56270 477 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 YPEL5P62699 121 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 NOMO3P69849 1222 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 POU6F2P78424 691 aaPredicted RBP5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 KCNJ10P78508 379 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 RBP5P82980 135 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 MYBPC1Q00872 1141 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 DEFA6Q01524 100 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 RBPJQ06330 500 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 DUSP8Q13202 625 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 PMS2P11Q13670 270 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 LTB4RQ15722 352 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 ALG11Q2TAA5 492 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 INTS11Q5TA45 600 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 ATG16L1Q676U5 607 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 B3GNTL1Q67FW5 361 aaPredicted RBP5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 SULT1C3Q6IMI6 304 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 RETSATQ6NUM9 610 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 ZNF529Q6P280 563 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 TMEM71Q6P5X7 295 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 IYDQ6PHW0 289 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 BLOC1S2Q6QNY1 142 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 TAF8Q7Z7C8 310 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 IGFN1Q86VF2 1251 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 MICU2Q8IYU8 434 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 ZNF540Q8NDQ6 660 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 OR8K5Q8NH50 307 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 FIBINQ8TAL6 211 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 TCP10LQ8TDR4 215 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 CA5BP1Q8WTZ4 195 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 PIK3R3Q92569 461 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 KRT35Q92764 455 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 RBM15Q96T37 977 aaKnown RBP eCLIP5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 FMO2Q99518 471 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 SORT1Q99523 831 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 ZSCAN5AQ9BUG6 496 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 BDH2Q9BUT1 245 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 TLR10Q9BXR5 811 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 AP1M1Q9BXS5 423 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 OSBPL8Q9BZF1 889 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 DPEP2Q9H4A9 486 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 XKR8Q9H6D3 395 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 PNPLA8Q9NP80 782 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 LHX9Q9NQ69 397 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 KLHL1Q9NR64 748 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 ACTR3BQ9P1U1 418 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 CYB5R1Q9UHQ9 305 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 HAO1Q9UJM8 370 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 RPS6KA6Q9UK32 745 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 SPATA2Q9UM82 520 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 KCNK7Q9Y2U2 307 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 RBMX2Q9Y388 322 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 PLEKHM1Q9Y4G2 1056 aa5.19□□□□□ -1.58
ECHDC1-206ENST00000417628 A0A087WXM4 84 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 IGHV1OR21-1A0A087WYE8 117 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 CCDC78A2IDD5 438 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 A8MU76 341 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 LGALS16A8MUM7 142 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 ABCD4O14678 606 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 GYG2O15488 501 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 RAD51CO43502 376 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 GMDSO60547 372 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 EDF1O60869 148 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 SRGAP2O75044 1071 aa5.18□□□□□ -1.58
ECHDC1-206ENST00000417628 BCAS1O75363 584 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms