RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CASRP41180 1078 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 RNF4P78317 190 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 MAP4K2Q12851 820 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 NADK2Q4G0N4 442 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 RNF111Q6ZNA4 994 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 Q6ZS92 163 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 BEST3Q8N1M1 668 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 LIX1Q8N485 282 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 ARFGAP2Q8N6H7 521 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 ZNF321PQ8N8H1 164 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 OR7G1Q8NGA0 311 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 SUN3Q8TAQ9 357 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 PIWIL2Q8TC59 973 aaKnown RBP21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 THAP3Q8WTV1 239 aaPredicted RBP21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 MTERF3Q96E29 417 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 C7orf26Q96N11 449 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 UTP23Q9BRU9 249 aaKnown RBP21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 BRINP2Q9C0B6 783 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 REEP4Q9H6H4 257 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 SLAMF7Q9NQ25 335 aa21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 NOP53Q9NZM5 478 aaKnown RBP21.47■■□□□ 1.03
SMARCB1-205ENST00000417137 OR5H15A6NDH6 313 aa21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 GABRR3A8MPY1 467 aa21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 NTSP30990 170 aa21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 CD97P48960 835 aa21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 FUT7Q11130 342 aa21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 CEBPEQ15744 281 aa21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 SLC6A19Q695T7 634 aa21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 SLC29A4Q7RTT9 530 aa21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 VWA5B2Q8N398 1253 aa21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 HORMAD2Q8N7B1 307 aa21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 GFM2Q969S9 779 aaKnown RBP21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 PPCDCQ96CD2 204 aa21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 ZNF764Q96H86 408 aaPredicted RBP21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 NPAS2Q99743 824 aa21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 C1orf50Q9BV19 199 aa21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 ASIC5Q9NY37 505 aa21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 MYOTQ9UBF9 498 aa21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 MARCOQ9UEW3 520 aaPredicted RBP21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 YARS2Q9Y2Z4 477 aaKnown RBP21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 ASH1LQ9NR48 2969 aaKnown RBP21.46■■□□□ 1.03
SMARCB1-205ENST00000417137 TRAV17A0A0B4J275 112 aa21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 SUV39H1O43463 412 aa21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 AKAP10O43572 662 aa21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 TBX19O60806 448 aa21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 LRATO95237 230 aa21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 ZIC2O95409 532 aaPredicted RBP21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 PCSK2P16519 638 aa21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 LBPP18428 481 aa21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 HPCAL1P37235 193 aa21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 PRICKLE4Q2TBC4 344 aa21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 FAM180BQ6P0A1 224 aa21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 ZNF605Q86T29 641 aa21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 WDR75Q8IWA0 830 aaKnown RBP21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 FAM9CQ8IZT9 166 aa21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 CLHC1Q8NHS4 586 aa21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 NUBPLQ8TB37 319 aa21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 DOK4Q8TEW6 326 aa21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 CKAP2Q8WWK9 683 aa21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 MAGEB18Q96M61 343 aa21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 PRPF18Q99633 342 aaKnown RBP21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 RYDENQ9NUL5 291 aaKnown RBP21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 MAPRE3Q9UPY8 281 aa21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 EXO1Q9UQ84 846 aaKnown RBP21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 CFL2Q9Y281 166 aa21.45■■□□□ 1.02
SMARCB1-205ENST00000417137 DOCK10Q96BY6 2186 aa21.44■■□□□ 1.02
SMARCB1-205ENST00000417137 MYO1GB0I1T2 1018 aa21.44■■□□□ 1.02
SMARCB1-205ENST00000417137 HRKO00198 91 aa21.44■■□□□ 1.02
SMARCB1-205ENST00000417137 MAN1A2O60476 641 aa21.44■■□□□ 1.02
SMARCB1-205ENST00000417137 ITGA10O75578 1167 aa21.44■■□□□ 1.02
SMARCB1-205ENST00000417137 BCAS2O75934 225 aaPredicted RBP21.44■■□□□ 1.02
SMARCB1-205ENST00000417137 TNFSF10P50591 281 aa21.44■■□□□ 1.02
SMARCB1-205ENST00000417137 SLC37A1P57057 533 aa21.44■■□□□ 1.02
SMARCB1-205ENST00000417137 OC90Q02509 493 aaPredicted RBP21.44■■□□□ 1.02
SMARCB1-205ENST00000417137 ZNF169Q14929 603 aaPredicted RBP21.44■■□□□ 1.02
SMARCB1-205ENST00000417137 PLEKHN1Q494U1 663 aaPredicted RBP21.44■■□□□ 1.02
SMARCB1-205ENST00000417137 TMEM156Q8N614 296 aa21.44■■□□□ 1.02
SMARCB1-205ENST00000417137 CATSPER1Q8NEC5 780 aa21.44■■□□□ 1.02
SMARCB1-205ENST00000417137 ZNF675Q8TD23 568 aa21.44■■□□□ 1.02
SMARCB1-205ENST00000417137 ERP27Q96DN0 273 aa21.44■■□□□ 1.02
SMARCB1-205ENST00000417137 OR10A5Q9H207 317 aa21.44■■□□□ 1.02
SMARCB1-205ENST00000417137 MAT2BQ9NZL9 334 aa21.44■■□□□ 1.02
SMARCB1-205ENST00000417137 SH3BP4Q9P0V3 963 aa21.44■■□□□ 1.02
SMARCB1-205ENST00000417137 PRKNO60260 465 aaPredicted RBP21.43■■□□□ 1.02
SMARCB1-205ENST00000417137 SLITRK5O94991 958 aa21.43■■□□□ 1.02
SMARCB1-205ENST00000417137 F10P00742 488 aa21.43■■□□□ 1.02
SMARCB1-205ENST00000417137 CT62P0C5K7 136 aa21.43■■□□□ 1.02
SMARCB1-205ENST00000417137 PRPS1L1P21108 318 aa21.43■■□□□ 1.02
SMARCB1-205ENST00000417137 SSTR4P31391 388 aa21.43■■□□□ 1.02
SMARCB1-205ENST00000417137 TRHRP34981 398 aaPredicted RBP21.43■■□□□ 1.02
SMARCB1-205ENST00000417137 CD96P40200 585 aa21.43■■□□□ 1.02
SMARCB1-205ENST00000417137 CYB561P49447 251 aa21.43■■□□□ 1.02
SMARCB1-205ENST00000417137 SSR4P51571 173 aa21.43■■□□□ 1.02
SMARCB1-205ENST00000417137 NCBP2P52298 156 aaKnown RBP eCLIP21.43■■□□□ 1.023e-7■■□□□ 13.9
SMARCB1-205ENST00000417137 TUBA3CQ13748 450 aa21.43■■□□□ 1.02
SMARCB1-205ENST00000417137 HLA-DQA1Q5Y7H0 255 aa21.43■■□□□ 1.02
SMARCB1-205ENST00000417137 TUBA3EQ6PEY2 450 aa21.43■■□□□ 1.02
SMARCB1-205ENST00000417137 LARP4Q71RC2 724 aaKnown RBP eCLIP21.43■■□□□ 1.02
SMARCB1-205ENST00000417137 NATD1Q8N6N6 113 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms