RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 SAMD11Q96NU1 681 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 SMAD5Q99717 465 aaKnown RBP13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 MRPL39Q9NYK5 338 aaKnown RBP13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 NKIRAS2Q9NYR9 191 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 TRPM5Q9NZQ8 1165 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 GMEB2Q9UKD1 530 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 MAP4K5Q9Y4K4 846 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 MYO10Q9HD67 2058 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 MYO15AQ9UKN7 3530 aa13.98□□□□□ -0.17
NCKIPSD-204ENST00000416649 TRBV4-1A0A0J9YWV2 114 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 PRAMEF11O60813 436 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 DUSP4Q13115 394 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 SCARB2Q14108 478 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 MEDAGQ5VYS4 303 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 TMEM107Q6UX40 140 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 MARCH9Q86YJ5 346 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 ANKRD53Q8N9V6 530 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 OR4K1Q8NGD4 311 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 OR4A15Q8NGL6 344 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 OR8D4Q8NGM9 314 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 CMTM7Q96FZ5 175 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 P2RY13Q9BPV8 354 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 USB1Q9BQ65 265 aaKnown RBP13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 ZNF416Q9BWM5 594 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 NLNQ9BYT8 704 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 GPR63Q9BZJ6 419 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 SPRTNQ9H040 489 aaPredicted RBP13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 EMC7Q9NPA0 242 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 CLEC4AQ9UMR7 237 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 FKBP7Q9Y680 259 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 PRSS21Q9Y6M0 314 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 THSD7BQ9C0I4 1608 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 ARPC4-TTLL3A0A0A6YYG9 625 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 NDUFA2O43678 99 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 BNIP3LO60238 219 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 DPM1O60762 260 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 DGKAP23743 735 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 PTX3P26022 381 aaPredicted RBP13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 SLC6A1P30531 599 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 SLC11A1P49279 550 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 XKP51811 444 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 GNA13Q14344 377 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 TEAD4Q15561 434 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 RTP2Q5QGT7 225 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 SPOUT1Q5T280 376 aaKnown RBP13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 IDNKQ5T6J7 187 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.97□□□□□ -0.174e-15■■■■■ 38
NCKIPSD-204ENST00000416649 KCNJ15Q99712 375 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 TMEM175Q9BSA9 504 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 HTATIP2Q9BUP3 242 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 CCSER2Q9H7U1 834 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 PCDHB16Q9NRJ7 776 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 ENAMQ9NRM1 1142 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 KCMF1Q9P0J7 381 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 ENOPH1Q9UHY7 261 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 ZNF175Q9Y473 711 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 KCNMB2Q9Y691 235 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 TCRBV16S1A1N1A0A5B0 115 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 CD8B2A6NJW9 211 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 CD8BP10966 210 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 ELK1P19419 428 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 ZP3P21754 424 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 PCGF2P35227 344 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 SOX18P35713 384 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 PLK5Q496M5 336 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 ATP13A5Q4VNC0 1218 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 IGSF11Q5DX21 431 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 ARMC12Q5T9G4 340 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 RAET1GQ6H3X3 334 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 CEACAM20Q6UY09 585 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 SERPINA9Q86WD7 417 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 GPR156Q8NFN8 814 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 OR7G3Q8NG95 312 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 OR52I1Q8NGK6 324 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 COQ8AQ8NI60 647 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 NEIL3Q8TAT5 605 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 PXYLP1Q8TE99 480 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 ASB12Q8WXK4 309 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 CXorf58Q96LI9 332 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 ATF6BQ99941 703 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 THAP7Q9BT49 309 aaPredicted RBP13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 NT5DC2Q9H857 520 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 COPS3Q9UNS2 423 aa13.97□□□□□ -0.17
NCKIPSD-204ENST00000416649 SCN5AQ14524 2016 aa13.96□□□□□ -0.17
NCKIPSD-204ENST00000416649 TRBC2A0A5B9 178 aa13.96□□□□□ -0.17
NCKIPSD-204ENST00000416649 SIGLEC5O15389 551 aa13.96□□□□□ -0.17
NCKIPSD-204ENST00000416649 ADAM12O43184 909 aa13.96□□□□□ -0.17
NCKIPSD-204ENST00000416649 ANXA5P08758 320 aa13.96□□□□□ -0.17
NCKIPSD-204ENST00000416649 CPEP16870 476 aa13.96□□□□□ -0.17
NCKIPSD-204ENST00000416649 RPIAP49247 311 aa13.96□□□□□ -0.17
NCKIPSD-204ENST00000416649 SIGLEC14Q08ET2 396 aa13.96□□□□□ -0.17
NCKIPSD-204ENST00000416649 CPTPQ5TA50 214 aa13.96□□□□□ -0.17
NCKIPSD-204ENST00000416649 TMEM91Q6ZNR0 172 aa13.96□□□□□ -0.17
NCKIPSD-204ENST00000416649 HJURPQ8NCD3 748 aaPredicted RBP13.96□□□□□ -0.17
NCKIPSD-204ENST00000416649 VPS37AQ8NEZ2 397 aa13.96□□□□□ -0.17
NCKIPSD-204ENST00000416649 UFD1Q92890 307 aa13.96□□□□□ -0.17
NCKIPSD-204ENST00000416649 C12orf66Q96MD2 445 aa13.96□□□□□ -0.17
NCKIPSD-204ENST00000416649 FAM120CQ9NX05 1096 aaKnown RBP13.96□□□□□ -0.17
NCKIPSD-204ENST00000416649 SZT2Q5T011 3432 aa13.96□□□□□ -0.17
NCKIPSD-204ENST00000416649 A0A1B0GVM2 712 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms