RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 ADAMTS5Q9UNA0 930 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 METTL21EPA6NDL7 271 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 KAT7O95251 611 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 SDC1P18827 310 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 HRH2P25021 359 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 CRISP1P54107 249 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 KCNC4Q03721 635 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 ZNF791Q3KP31 576 aaPredicted RBP12.33□□□□□ -0.44
SCN1B-202ENST00000415950 GXYLT1Q4G148 440 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 RPS26P11Q5JNZ5 115 aaPredicted RBP12.33□□□□□ -0.44
SCN1B-202ENST00000415950 PAMR1Q6UXH9 720 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 LRRN1Q6UXK5 716 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 MCEMP1Q8IX19 187 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 PELI3Q8N2H9 469 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 GOLM1Q8NBJ4 401 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 KLHDC9Q8NEP7 349 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 RFT1Q96AA3 541 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 C1orf74Q96LT6 269 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 ARL6Q9H0F7 186 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 XKR8Q9H6D3 395 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 CPNE5Q9HCH3 593 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 IL26Q9NPH9 171 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 USP3Q9Y6I4 520 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 LOC105369274A0A096LPK9 316 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 TEX13DA0A0J9YY54 714 aaPredicted RBP12.32□□□□□ -0.44
SCN1B-202ENST00000415950 A0A1W2PQ09 198 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 SMAD6O43541 496 aaKnown RBP12.32□□□□□ -0.44
SCN1B-202ENST00000415950 FRS3O43559 492 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 NUAK1O60285 661 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 ACRP10323 421 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 SRCP12931 536 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 IL7P13232 177 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 SLC11A1P49279 550 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 DSG2Q14126 1118 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 OR4N4Q8N0Y3 316 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 B3GNT7Q8NFL0 401 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 OR2AJ1Q8NGZ0 328 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 ARRDC2Q8TBH0 407 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 SMPDL3AQ92484 453 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 SNAPC3Q92966 411 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 TMEM41AQ96HV5 264 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 RBCK1Q9BYM8 510 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.32□□□□□ -0.44
SCN1B-202ENST00000415950 IFT52Q9Y366 437 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 ASB1Q9Y576 335 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 PCDHB11Q9Y5F2 797 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 WNT6Q9Y6F9 365 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 J3KTA2 159 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 ZNF208O43345 1280 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 SOX30O94993 753 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 IL3P08700 152 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 OR12D1P0DN82 309 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 HLA-EP13747 358 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 PTPN2P17706 415 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 TNFSF8P32971 234 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 ZNF763Q0D2J5 394 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 RASGEF1BQ0VAM2 473 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 NNATQ16517 81 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 PROX2Q3B8N5 592 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 ALG1LQ6GMV1 187 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 APCDD1Q8J025 514 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 CD300LFQ8TDQ1 290 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 AIFM2Q9BRQ8 373 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 AMBRA1Q9C0C7 1298 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 POPDC3Q9HBV1 291 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 ANKHQ9HCJ1 492 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 COL22A1Q8NFW1 1626 aaPredicted RBP12.32□□□□□ -0.44
SCN1B-202ENST00000415950 F5H0A9 414 aaPredicted RBP12.32□□□□□ -0.44
SCN1B-202ENST00000415950 FAM227AF5H4B4 570 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 ADAM23O75077 832 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 F8A1P23610 371 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 CDKN2CP42773 168 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 EIF5AP63241 154 aaKnown RBP12.32□□□□□ -0.44
SCN1B-202ENST00000415950 COQ5Q5HYK3 327 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 CEACAM19Q7Z692 300 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 SPRED1Q7Z699 444 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 GATSQ8NAP1 163 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 PXYLP1Q8TE99 480 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 P2RY13Q9BPV8 354 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 ACPTQ9BZG2 426 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 RANGRFQ9HD47 186 aaPredicted RBP12.32□□□□□ -0.44
SCN1B-202ENST00000415950 ANKMY1Q9P2S6 941 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 MT-ND5P03915 603 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 ITGA5P08648 1049 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 BPIP17213 487 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 VIPR1P32241 457 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 E2F1Q01094 437 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 SNTB2Q13425 540 aaKnown RBP12.32□□□□□ -0.44
SCN1B-202ENST00000415950 SPRYD7Q5W111 196 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 SFRP4Q6FHJ7 346 aaPredicted RBP12.32□□□□□ -0.44
SCN1B-202ENST00000415950 NRSN1Q8IZ57 195 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 CCDC54Q8NEL0 328 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 PHOSPHO1Q8TCT1 267 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 SLC5A11Q8WWX8 675 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 OR2B2Q9GZK3 357 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 C14orf105Q9NVL8 296 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 MEMO1Q9Y316 297 aa12.32□□□□□ -0.44
SCN1B-202ENST00000415950 GATBO75879 557 aaKnown RBP12.31□□□□□ -0.44
SCN1B-202ENST00000415950 GNRH1P01148 92 aa12.31□□□□□ -0.44
SCN1B-202ENST00000415950 EPHA2P29317 976 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms