RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 CSH1P0DML2 217 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 CSH2P0DML3 217 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 CYP4B1P13584 511 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 HOXB6P17509 224 aaKnown RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 FSHRP23945 695 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 YWHABP31946 246 aaKnown RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 CD96P40200 585 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 LIMK2P53671 638 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 DCAF7P61962 342 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 SLAQ13239 276 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 DGCR6Q14129 220 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 SPANXN2Q5MJ10 180 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 TREML2Q5T2D2 321 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 N4BP2L1Q5TBK1 243 aaPredicted RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 RNLSQ5VYX0 342 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 ZCCHC23Q6ZST2 131 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 LINGO2Q7L985 606 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 VSIG10LQ86VR7 867 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 MISPQ8IVT2 679 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 SDR42E1Q8WUS8 393 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 CRYGNQ8WXF5 182 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 COQ8BQ96D53 544 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 CCDC126Q96EE4 140 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 TGM7Q96PF1 710 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 HHIPQ96QV1 700 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 NODALQ96S42 347 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 VAT1Q99536 393 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 MMP19Q99542 508 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 MESP1Q9BRJ9 268 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 ZNF2Q9BSG1 426 aaPredicted RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 METTL8Q9H825 291 aaKnown RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 FBRSL1Q9HCM7 1045 aaKnown RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 RNF146Q9NTX7 359 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 FKBPLQ9UIM3 349 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 OAZ3Q9UMX2 235 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 ING4Q9UNL4 249 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 IFITM10A6NMD0 228 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 C1orf196B1AJZ1 125 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 D6RAR5 112 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 UPK1AO00322 258 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 SLC1A7O00341 560 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 INSIG1O15503 277 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 CHST10O43529 356 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 IGHEP01854 428 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 ALDOAP04075 364 aaKnown RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 EVX1P49640 407 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 RPL14P50914 215 aaKnown RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 ZNF81P51508 661 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 REEP5Q00765 189 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 MC2RQ01718 297 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 EVX2Q03828 476 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 RASGEF1BQ0VAM2 473 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 DUSP8Q13202 625 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 QPRTQ15274 297 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 SURF2Q15527 256 aaPredicted RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 PLEKHN1Q494U1 663 aaPredicted RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 TBCELQ5QJ74 424 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 ZNF691Q5VV52 312 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 GPAT2Q6NUI2 795 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 SHISA2Q6UWI4 295 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 BHLHA15Q7RTS1 189 aaPredicted RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 SLC47A2Q86VL8 602 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 ACBD4Q8NC06 268 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 BBS1Q8NFJ9 593 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 OR1S1Q8NH92 325 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 HMGCLL1Q8TB92 370 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 NT5C3BQ969T7 300 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 PARK7Q99497 189 aaKnown RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 SMAD5Q99717 465 aaKnown RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 NDUFAF3Q9BU61 184 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 TMEM117Q9H0C3 514 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 PCDHAC1Q9H158 963 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 POLR3FQ9H1D9 316 aaPredicted RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 CDCP1Q9H5V8 836 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 GALNT9Q9HCQ5 603 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 CCNB1IP1Q9NPC3 277 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 SOHLH2Q9NX45 425 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 SLCO1C1Q9NYB5 712 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 HCN3Q9P1Z3 774 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 CHRNA9Q9UGM1 479 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 ING1Q9UK53 422 aaPredicted RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 CNTN6Q9UQ52 1028 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 SIP14410 1827 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 C2orf92A0A1B0GVN3 265 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 A8MWP6 167 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 M0QYT0 321 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 KPNA3O00505 521 aaPredicted RBP4.97□□□□□ -1.61
HERC4-205ENST00000412272 PGRMC2O15173 223 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 MBTPS2O43462 519 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 XPNPEP2O43895 674 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 SOAT2O75908 522 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 GLUD1P00367 558 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 HLA-DQB1P01920 261 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 FGBP02675 491 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 ENGP17813 658 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 PAMP19021 973 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 TPSB2P20231 275 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 AGAP20933 346 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 DTYMKP23919 212 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 MAPK1P28482 360 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms