RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 HSPA12AO43301 675 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 CLDN11O75508 207 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 RFPL3O75679 317 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 POP7O75817 140 aaKnown RBP-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 ETHE1O95571 254 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 IGLV3-1P01715 115 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 CHRNA1P02708 482 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 ERCC1P07992 297 aaPredicted RBP-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 SNRPAP09012 282 aaKnown RBP-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 NUDT17P0C025 328 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 PGAM2P15259 253 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 DESP17661 470 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 PGAM1P18669 254 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 CD58P19256 250 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 CA4P22748 312 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 CCT6AP40227 531 aaKnown RBP-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 ETV6P41212 452 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 TSFMP43897 325 aaKnown RBP-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 TMED10P49755 219 aaKnown RBP-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 NUMBP49757 651 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 PRRX1P54821 245 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 HMGCS2P54868 508 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 KLRC3Q07444 240 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 ASAH1Q13510 395 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 LRRC32Q14392 662 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 LASP1Q14847 261 aaKnown RBP-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 TNIP1Q15025 636 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 SLC9A3R2Q15599 337 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 TRIP10Q15642 601 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 SYT14P1Q58G82 188 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 ELFN2Q5R3F8 820 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 LIN9Q5TKA1 542 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 ATF7IP2Q5U623 682 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 RNF220Q5VTB9 566 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 STUMQ69YW2 141 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 NXNQ6DKJ4 435 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 SDE2Q6IQ49 451 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 LCLAT1Q6UWP7 414 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 CCNI2Q6ZMN8 369 aaPredicted RBP-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 Q6ZQT7 251 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 GDPD3Q7L5L3 318 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZER1Q7Z7L7 766 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 GPR180Q86V85 440 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZGRF1Q86YA3 2104 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 LRRC49Q8IUZ0 686 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZDHHC21Q8IVQ6 265 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 VSTM4Q8IW00 320 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 PGAM4Q8N0Y7 254 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 TTC39CQ8N584 583 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 TRIML1Q8N9V2 468 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 WDR31Q8NA23 367 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZFP62Q8NB50 900 aaPredicted RBP-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 SPATA5Q8NB90 893 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 AVL9Q8NBF6 648 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 SIDT2Q8NBJ9 832 aaKnown RBP-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 APPL2Q8NEU8 664 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 CEP70Q8NHQ1 597 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 CCL4L1Q8NHW4 92 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 SPPL2BQ8TCT7 592 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 SLC20A1Q8WUM9 679 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 LMBR1Q8WVP7 490 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 TRAPPC12Q8WVT3 735 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 EXT2Q93063 718 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 TOP1MTQ969P6 601 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 DCPSQ96C86 337 aaKnown RBP-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 RNF125Q96EQ8 232 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 C12orf42Q96LP6 360 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 SAMD8Q96LT4 415 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 CATSPER2Q96P56 530 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 OR52B2Q96RD2 323 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 MPHOSPH8Q99549 860 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 OCR1Q9BZK8 76 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 SLC12A5Q9H2X9 1139 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 KCTD10Q9H3F6 313 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 CUEDC2Q9H467 287 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 EHD1Q9H4M9 534 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 TMEM38AQ9H6F2 299 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 AMBNQ9NP70 447 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 G6PC2Q9NQR9 355 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 PRDM11Q9NQV5 511 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 ECHDC1Q9NTX5 307 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 ABCB8Q9NUT2 735 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 RBM22Q9NW64 420 aaKnown RBP eCLIP-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 LHX3Q9UBR4 397 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 DDX25Q9UHL0 483 aaKnown RBP-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 CSNK1G3Q9Y6M4 447 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 SBF1O95248 1867 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 WDR97A6NE52 1622 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 SCAF11Q99590 1463 aaKnown RBP-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 ATAD5Q96QE3 1844 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 ARHGEF5Q12774 1597 aa-1.89□□□□□ -2.71
RNU4-88P-201ENST00000411220 FER1L4A9Z1Z3 1794 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 CASKIN1Q8WXD9 1431 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 DISP1Q96F81 1524 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 THADAQ6YHU6 1953 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 IGHV3-35A0A0C4DH35 117 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 IGHV4-61A0A0C4DH41 118 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 A0A1W2PP18 115 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 CPED1A4D0V7 1026 aa-1.9□□□□□ -2.71
RNU4-88P-201ENST00000411220 NKX6-3A6NJ46 265 aa-1.9□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms