RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 NTMQ9P121 344 aa12.83□□□□□ -0.36
LIMS1-205ENST00000410093 ZNF624Q9P2J8 865 aaPredicted RBP12.83□□□□□ -0.36
LIMS1-205ENST00000410093 SEC14L3Q9UDX4 400 aa12.83□□□□□ -0.36
LIMS1-205ENST00000410093 ACAD8Q9UKU7 415 aa12.83□□□□□ -0.36
LIMS1-205ENST00000410093 CES1P1Q9UKY3 287 aa12.83□□□□□ -0.36
LIMS1-205ENST00000410093 SLC9A8Q9Y2E8 581 aa12.83□□□□□ -0.36
LIMS1-205ENST00000410093 SH3GLB1Q9Y371 365 aa12.83□□□□□ -0.36
LIMS1-205ENST00000410093 WDFY4Q6ZS81 3184 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 CCDC88CQ9P219 2028 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 A0A1W2PR48 441 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 TCRBV21S2A2A0A5A6 115 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 GSAPA4D1B5 854 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 SH3D21A4FU49 640 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 SYT5O00445 386 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 ZSCAN9O15535 394 aaPredicted RBP12.82□□□□□ -0.36
LIMS1-205ENST00000410093 SLC28A2O43868 658 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 NDUFS2O75306 463 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 SOX30O94993 753 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 NR2F1P10589 423 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 GABRG2P18507 467 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 PCMT1P22061 227 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 CBLP22681 906 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 PCSK6P29122 969 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 ACSL1P33121 698 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 POLR2IP36954 125 aaKnown RBP12.82□□□□□ -0.36
LIMS1-205ENST00000410093 SLC19A1P41440 591 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 BLKP51451 505 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 CLDN2P57739 230 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 CDC42P60953 191 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 DCTN2Q13561 401 aaKnown RBP12.82□□□□□ -0.36
LIMS1-205ENST00000410093 NPTX1Q15818 432 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 EXOC3L2Q2M3D2 409 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 SYT6Q5T7P8 510 aaPredicted RBP12.82□□□□□ -0.36
LIMS1-205ENST00000410093 ANKRD34AQ69YU3 496 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 TNFAIP8L2Q6P589 184 aaPredicted RBP12.82□□□□□ -0.36
LIMS1-205ENST00000410093 ABHD13Q7L211 337 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 PLD3Q8IV08 490 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 SLC5A8Q8N695 610 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 OR8K5Q8NH50 307 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 GPBAR1Q8TDU6 330 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 TREX2Q9BQ50 279 aaPredicted RBP12.82□□□□□ -0.36
LIMS1-205ENST00000410093 AICDAQ9GZX7 198 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 LHPPQ9H008 270 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 ABCG4Q9H172 646 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 OR51I1Q9H343 314 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 KLHL31Q9H511 634 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 EBF1Q9UH73 591 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 CDC14AQ9UNH5 594 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 PCDHGA6Q9Y5G7 932 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 SPACA6W5XKT8 324 aa12.82□□□□□ -0.36
LIMS1-205ENST00000410093 C2orf74A8MZ97 194 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 PTGES3LE9PB15 166 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 B4GAT1O43505 415 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 FAM20BO75063 409 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 RASGRP1O95267 797 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 AIFM1O95831 613 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 VIPP01282 170 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 DCNP07585 359 aaKnown RBP12.81□□□□□ -0.36
LIMS1-205ENST00000410093 HTR1AP08908 422 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 SMIM10L1P0DMW3 83 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 NR2F6P10588 404 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 AGXTP21549 392 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 OR1E2P47887 323 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 ST13P50502 369 aaKnown RBP12.81□□□□□ -0.36
LIMS1-205ENST00000410093 MAPK10P53779 464 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 COX10Q12887 443 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 DUSP7Q16829 419 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 ALG11Q2TAA5 492 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 ATAD3BQ5T9A4 648 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 KIAA0895LQ68EN5 471 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 TMEM92Q6UXU6 159 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 ZNF540Q8NDQ6 660 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 RHOXF1Q8NHV9 184 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 CNIH3Q8TBE1 160 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 TRUB1Q8WWH5 349 aaKnown RBP12.81□□□□□ -0.36
LIMS1-205ENST00000410093 FAM3CQ92520 227 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 SMIM10Q96HG1 83 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 PINK1Q9BXM7 581 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 LYRM4Q9HD34 91 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 NECTIN3Q9NQS3 549 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 ATG4BQ9Y4P1 393 aa12.81□□□□□ -0.36
LIMS1-205ENST00000410093 KMT2EQ8IZD2 1858 aa12.8□□□□□ -0.36
LIMS1-205ENST00000410093 FANCMQ8IYD8 2048 aa12.8□□□□□ -0.36
LIMS1-205ENST00000410093 FAM170BA6NMN3 283 aa12.8□□□□□ -0.36
LIMS1-205ENST00000410093 AXIN1O15169 862 aa12.8□□□□□ -0.36
LIMS1-205ENST00000410093 H1F0P07305 194 aaKnown RBP12.8□□□□□ -0.36
LIMS1-205ENST00000410093 CYP4B1P13584 511 aa12.8□□□□□ -0.36
LIMS1-205ENST00000410093 IFNA8P32881 189 aa12.8□□□□□ -0.36
LIMS1-205ENST00000410093 TNFRSF17Q02223 184 aa12.8□□□□□ -0.36
LIMS1-205ENST00000410093 EMX1Q04741 257 aaPredicted RBP12.8□□□□□ -0.36
LIMS1-205ENST00000410093 LAPTM4AQ15012 233 aa12.8□□□□□ -0.36
LIMS1-205ENST00000410093 ANGPT1Q15389 498 aa12.8□□□□□ -0.36
LIMS1-205ENST00000410093 DCST1Q5T197 706 aa12.8□□□□□ -0.36
LIMS1-205ENST00000410093 NIPAL1Q6NVV3 410 aa12.8□□□□□ -0.36
LIMS1-205ENST00000410093 Q6ZSR6 202 aa12.8□□□□□ -0.36
LIMS1-205ENST00000410093 ENTHD1Q8IYW4 607 aa12.8□□□□□ -0.36
LIMS1-205ENST00000410093 SMYD1Q8NB12 490 aa12.8□□□□□ -0.36
LIMS1-205ENST00000410093 FLVCR1-AS1Q8TAF5 88 aa12.8□□□□□ -0.36
LIMS1-205ENST00000410093 TSACCQ96A04 125 aaPredicted RBP12.8□□□□□ -0.36
LIMS1-205ENST00000410093 RERGQ96A58 199 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms