RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 CNIH3Q8TBE1 160 aa19.51■□□□□ 0.71
USP39-203ENST00000409470 VCX3AQ9NNX9 186 aa19.51■□□□□ 0.71
USP39-203ENST00000409470 FBXL21Q9UKT6 434 aa19.51■□□□□ 0.71
USP39-203ENST00000409470 HSPE1-MOB4S4R3N1 261 aa19.51■□□□□ 0.71
USP39-203ENST00000409470 KIF1CO43896 1103 aaKnown RBP19.51■□□□□ 0.71
USP39-203ENST00000409470 RECKO95980 971 aa19.51■□□□□ 0.71
USP39-203ENST00000409470 EPHA2P29317 976 aa19.51■□□□□ 0.71
USP39-203ENST00000409470 TLX1P31314 330 aaPredicted RBP19.51■□□□□ 0.71
USP39-203ENST00000409470 MC3RP41968 323 aa19.51■□□□□ 0.71
USP39-203ENST00000409470 CRISP3P54108 245 aa19.51■□□□□ 0.71
USP39-203ENST00000409470 LIM2P55344 173 aa19.51■□□□□ 0.71
USP39-203ENST00000409470 FOXD4Q12950 439 aaPredicted RBP19.51■□□□□ 0.71
USP39-203ENST00000409470 PMS2P3Q13401 168 aa19.51■□□□□ 0.71
USP39-203ENST00000409470 FZD5Q13467 585 aa19.51■□□□□ 0.71
USP39-203ENST00000409470 RUNX2Q13950 521 aa19.51■□□□□ 0.71
USP39-203ENST00000409470 CEBPEQ15744 281 aa19.51■□□□□ 0.71
USP39-203ENST00000409470 LAIR2Q6ISS4 152 aa19.51■□□□□ 0.71
USP39-203ENST00000409470 RBM12BQ8IXT5 1001 aaKnown RBP19.51■□□□□ 0.71
USP39-203ENST00000409470 BPIFB6Q8NFQ5 453 aa19.51■□□□□ 0.71
USP39-203ENST00000409470 PHF10Q8WUB8 498 aaKnown RBP19.51■□□□□ 0.71
USP39-203ENST00000409470 ACER3Q9NUN7 267 aa19.51■□□□□ 0.71
USP39-203ENST00000409470 PTTG2Q9NZH5 202 aa19.51■□□□□ 0.71
USP39-203ENST00000409470 KCMF1Q9P0J7 381 aa19.51■□□□□ 0.71
USP39-203ENST00000409470 NDRG4Q9ULP0 352 aaKnown RBP19.51■□□□□ 0.71
USP39-203ENST00000409470 DNAH14Q0VDD8 3507 aa19.51■□□□□ 0.71
USP39-203ENST00000409470 KRBA1A5PL33 1030 aa19.5■□□□□ 0.71
USP39-203ENST00000409470 OR5K3A6NET4 321 aa19.5■□□□□ 0.71
USP39-203ENST00000409470 SLC1A7O00341 560 aa19.5■□□□□ 0.71
USP39-203ENST00000409470 ZSCAN9O15535 394 aaPredicted RBP19.5■□□□□ 0.71
USP39-203ENST00000409470 ANXA8P13928 327 aa19.5■□□□□ 0.71
USP39-203ENST00000409470 ALOX12P18054 663 aa19.5■□□□□ 0.71
USP39-203ENST00000409470 CD27P26842 260 aa19.5■□□□□ 0.71
USP39-203ENST00000409470 GABARAPL2P60520 117 aa19.5■□□□□ 0.71
USP39-203ENST00000409470 PPP1CAP62136 330 aa19.5■□□□□ 0.71
USP39-203ENST00000409470 COL9A2Q14055 689 aaPredicted RBP19.5■□□□□ 0.71
USP39-203ENST00000409470 NUP43Q8NFH3 380 aa19.5■□□□□ 0.71
USP39-203ENST00000409470 KLHL6Q8WZ60 621 aa19.5■□□□□ 0.71
USP39-203ENST00000409470 ELP4Q96EB1 424 aa19.5■□□□□ 0.71
USP39-203ENST00000409470 C16orf58Q96GQ5 468 aa19.5■□□□□ 0.71
USP39-203ENST00000409470 C10orf90Q96M02 699 aa19.5■□□□□ 0.71
USP39-203ENST00000409470 EQTNQ9NQ60 294 aa19.5■□□□□ 0.71
USP39-203ENST00000409470 RHCGQ9UBD6 479 aa19.5■□□□□ 0.71
USP39-203ENST00000409470 TRIOO75962 3097 aa19.5■□□□□ 0.71
USP39-203ENST00000409470 CCDC88CQ9P219 2028 aa19.5■□□□□ 0.71
USP39-203ENST00000409470 GON4LQ3T8J9 2241 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 ABCB7O75027 752 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 ANGPTL1O95841 491 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 KCNJ5P48544 419 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 RPP38P78345 283 aaKnown RBP19.49■□□□□ 0.71
USP39-203ENST00000409470 OLR1P78380 273 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 GNA13Q14344 377 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 LTB4RQ15722 352 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 RNF44Q7L0R7 432 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 ZNF438Q7Z4V0 828 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 ZNF605Q86T29 641 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 CLVS1Q8IUQ0 354 aaPredicted RBP19.49■□□□□ 0.71
USP39-203ENST00000409470 TAGAPQ8N103 731 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 VANGL1Q8TAA9 524 aaPredicted RBP19.49■□□□□ 0.71
USP39-203ENST00000409470 FBLIM1Q8WUP2 373 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 APOBEC4Q8WW27 367 aaKnown RBP19.49■□□□□ 0.71
USP39-203ENST00000409470 RSC1A1Q92681 617 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 KAT2AQ92830 837 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 COL26A1Q96A83 441 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 ZNF354BQ96LW1 612 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 GABARAPL3Q9BY60 117 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 RLIMQ9NVW2 624 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 DAPP1Q9UN19 280 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 GPC6Q9Y625 555 aaPredicted RBP19.49■□□□□ 0.71
USP39-203ENST00000409470 KNL1Q8NG31 2342 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 ZNF860A6NHJ4 632 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 METTL12A8MUP2 240 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 PCDH17O14917 1159 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 WNT1P04628 370 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 IL9P15248 144 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 CD38P28907 300 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 XKP51811 444 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 SIM1P81133 766 aaPredicted RBP19.49■□□□□ 0.71
USP39-203ENST00000409470 TSPYL5Q86VY4 417 aaPredicted RBP19.49■□□□□ 0.71
USP39-203ENST00000409470 LRRC25Q8N386 305 aaPredicted RBP19.49■□□□□ 0.71
USP39-203ENST00000409470 GALNT15Q8N3T1 639 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 OR4K14Q8NGD5 310 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 BBS10Q8TAM1 723 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 SGCDQ92629 289 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 CSF3RQ99062 836 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 CCDC3Q9BQI4 270 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 ANKRA2Q9H9E1 313 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 ZNF556Q9HAH1 456 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 MS4A12Q9NXJ0 267 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 POFUT2Q9Y2G5 429 aa19.49■□□□□ 0.71
USP39-203ENST00000409470 MRPS2Q9Y399 296 aaKnown RBP19.49■□□□□ 0.71
USP39-203ENST00000409470 PTGES3LE9PB15 166 aa19.48■□□□□ 0.71
USP39-203ENST00000409470 DNAJB6O75190 326 aa19.48■□□□□ 0.71
USP39-203ENST00000409470 CCNB2O95067 398 aa19.48■□□□□ 0.71
USP39-203ENST00000409470 MAOBP27338 520 aa19.48■□□□□ 0.71
USP39-203ENST00000409470 TTKP33981 857 aa19.48■□□□□ 0.71
USP39-203ENST00000409470 HMGA2P52926 109 aa19.48■□□□□ 0.71
USP39-203ENST00000409470 RAB39AQ14964 217 aa19.48■□□□□ 0.71
USP39-203ENST00000409470 GPAT3Q53EU6 434 aa19.48■□□□□ 0.71
USP39-203ENST00000409470 GPR153Q6NV75 609 aa19.48■□□□□ 0.71
USP39-203ENST00000409470 OLIG3Q7RTU3 272 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms