RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 CNOT2Q9NZN8 540 aaKnown RBP13.37□□□□□ -0.27
DUSP28-202ENST00000405954 RGPD3A6NKT7 1758 aaPredicted RBP13.37□□□□□ -0.27
DUSP28-202ENST00000405954 RGPD4Q7Z3J3 1758 aa13.37□□□□□ -0.27
DUSP28-202ENST00000405954 GRXCR2A6NFK2 248 aa13.37□□□□□ -0.27
DUSP28-202ENST00000405954 IQCF5A8MTL0 148 aa13.37□□□□□ -0.27
DUSP28-202ENST00000405954 SPP1P10451 314 aa13.37□□□□□ -0.27
DUSP28-202ENST00000405954 PTAFRP25105 342 aa13.37□□□□□ -0.27
DUSP28-202ENST00000405954 CHI3L1P36222 383 aaPredicted RBP13.37□□□□□ -0.27
DUSP28-202ENST00000405954 XKP51811 444 aa13.37□□□□□ -0.27
DUSP28-202ENST00000405954 ATXN7L3Q14CW9 347 aaPredicted RBP13.37□□□□□ -0.27
DUSP28-202ENST00000405954 TAF1AQ15573 450 aaPredicted RBP13.37□□□□□ -0.27
DUSP28-202ENST00000405954 CELF5Q8N6W0 485 aaKnown RBP13.37□□□□□ -0.27
DUSP28-202ENST00000405954 SCARB1Q8WTV0 552 aa13.37□□□□□ -0.27
DUSP28-202ENST00000405954 FAM167AQ96KS9 214 aa13.37□□□□□ -0.27
DUSP28-202ENST00000405954 ZNF382Q96SR6 550 aa13.37□□□□□ -0.27
DUSP28-202ENST00000405954 CDCA4Q9BXL8 241 aa13.37□□□□□ -0.27
DUSP28-202ENST00000405954 CACYBPQ9HB71 228 aaKnown RBP13.37□□□□□ -0.27
DUSP28-202ENST00000405954 DLL4Q9NR61 685 aa13.37□□□□□ -0.27
DUSP28-202ENST00000405954 PLEKHB1Q9UF11 243 aaPredicted RBP13.37□□□□□ -0.27
DUSP28-202ENST00000405954 GNG14A0A1W2PPG7 69 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 OR14I1A6ND48 311 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 MFSD2BA6NFX1 497 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 FARS2O95363 451 aaKnown RBP13.36□□□□□ -0.27
DUSP28-202ENST00000405954 RPS17P08708 135 aaKnown RBP13.36□□□□□ -0.27
DUSP28-202ENST00000405954 EPB42P16452 691 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 HSD17B2P37059 387 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 HTR4Q13639 388 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 SGCAQ16586 387 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 MPEG1Q2M385 716 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 CYB5R2Q6BCY4 276 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 IQCF1Q8N6M8 205 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 TEX12Q9BXU0 123 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 CSNK1G3Q9Y6M4 447 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 GPR31O00270 319 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 RFXAPO00287 272 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 SULT1C2O00338 296 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 MATN3O15232 486 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 EIF3GO75821 320 aaKnown RBP eCLIP13.36□□□□□ -0.27
DUSP28-202ENST00000405954 HLA-DPB1P04440 258 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 FDXRP22570 491 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 BDKRB1P46663 353 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 EVX1P49640 407 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 RGS4P49798 205 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 STK19P49842 368 aaPredicted RBP13.36□□□□□ -0.27
DUSP28-202ENST00000405954 AFF1P51825 1210 aaKnown RBP13.36□□□□□ -0.27
DUSP28-202ENST00000405954 XKR7Q5GH72 579 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 GSG1LQ6UXU4 331 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 SLC30A8Q8IWU4 369 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 SVBPQ8N300 66 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 HDDC3Q8N4P3 179 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 OR4K2Q8NGD2 314 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 ZDHHC12Q96GR4 267 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 SEMA3CQ99985 751 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 GABARAPL1Q9H0R8 117 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 AGO3Q9H9G7 860 aaKnown RBP13.36□□□□□ -0.27
DUSP28-202ENST00000405954 ASB1Q9Y576 335 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 NME7Q9Y5B8 376 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 PDE4DIPQ5VU43 2346 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 TRABD2BA6NFA1 517 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 ZBTB42B2RXF5 422 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 FAM227AF5H4B4 570 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 J3KTA2 159 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 GPR182O15218 404 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 ST8SIA5O15466 376 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 ADAM12O43184 909 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 FZD6O60353 706 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 SLC19A2O60779 497 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 PTX3P26022 381 aaPredicted RBP13.36□□□□□ -0.27
DUSP28-202ENST00000405954 S100A11P31949 105 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 POU4F2Q12837 409 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 MLLT11Q13015 90 aaPredicted RBP13.36□□□□□ -0.27
DUSP28-202ENST00000405954 CAMK2DQ13557 499 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 FBXO47Q5MNV8 452 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 NCEH1Q6PIU2 408 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 LINGO2Q7L985 606 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 NPY6RQ99463 290 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 CPPED1Q9BRF8 314 aaPredicted RBP13.36□□□□□ -0.27
DUSP28-202ENST00000405954 ADAT1Q9BUB4 502 aaKnown RBP13.36□□□□□ -0.27
DUSP28-202ENST00000405954 ADGRE3Q9BY15 652 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 BTBD1Q9H0C5 482 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 ACTL8Q9H568 366 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 ESRP2Q9H6T0 727 aaKnown RBP13.36□□□□□ -0.27
DUSP28-202ENST00000405954 GPN1Q9HCN4 374 aaPredicted RBP13.36□□□□□ -0.27
DUSP28-202ENST00000405954 NLGN3Q9NZ94 848 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 ACSL6Q9UKU0 697 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 ASF1AQ9Y294 204 aa13.36□□□□□ -0.27
DUSP28-202ENST00000405954 TIMM13Q9Y5L4 95 aaPredicted RBP13.36□□□□□ -0.27
DUSP28-202ENST00000405954 ZNF646O15015 1829 aaPredicted RBP13.35□□□□□ -0.27
DUSP28-202ENST00000405954 HRO43593 1189 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 BEST1O76090 585 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 NMBP08949 121 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 PITPNBP48739 271 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 RAB2AP61019 212 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 PDZK1IP1Q13113 114 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 GINS1Q14691 196 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 RBMS2Q15434 407 aaKnown RBP13.35□□□□□ -0.27
DUSP28-202ENST00000405954 KYAT1Q16773 422 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 HFEQ30201 348 aa13.35□□□□□ -0.27
DUSP28-202ENST00000405954 INTS6LQ5JSJ4 861 aaKnown RBP13.35□□□□□ -0.27
DUSP28-202ENST00000405954 TAF8Q7Z7C8 310 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms