RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 ENTHD1Q8IYW4 607 aa13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 GPR150Q8NGU9 434 aa13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 ZNF296Q8WUU4 475 aaPredicted RBP13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 TRIM43Q96BQ3 446 aaPredicted RBP13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 SGTBQ96EQ0 304 aa13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 ZNF300Q96RE9 604 aaPredicted RBP13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 BRINP2Q9C0B6 783 aa13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 ZCCHC3Q9NUD5 404 aaKnown RBP13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 ACSL6Q9UKU0 697 aa13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 KLK4Q9Y5K2 254 aa13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 SBF2Q86WG5 1849 aa13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 KANTRA0A1W2PQU2 76 aa13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 OR2AT4A6NND4 320 aa13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 KLKB1P03952 638 aa13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 ACP5P13686 325 aa13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 TMEM115Q12893 351 aaPredicted RBP13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 MEDAGQ5VYS4 303 aa13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 RTN4RL1Q86UN2 441 aaPredicted RBP13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 SYNPOQ8N3V7 929 aa13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 IQCF1Q8N6M8 205 aa13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 PJA1Q8NG27 643 aa13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 IRF7Q92985 503 aa13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 NUS1Q96E22 293 aa13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 EGLN2Q96KS0 407 aa13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 NIPAL2Q9H841 368 aa13.93□□□□□ -0.18
RPRD1A-202ENST00000399022 COL11A2P13942 1736 aaPredicted RBP13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 TRIP11Q15643 1979 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 NPIPB15A6NHN6 443 aaPredicted RBP13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 LRRN3E7EW58 273 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 J3QLW9 94 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 HPGDSO60760 199 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 LAMP1P11279 417 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 ZNF19P17023 458 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 CCR4P51679 360 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 SEC13P55735 322 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 TAS2R50P59544 299 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 CTBSQ01459 385 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 DSG2Q14126 1118 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 SF3A2Q15428 464 aaKnown RBP13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 GPR68Q15743 365 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 MFSD4AQ8N468 514 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 OR51G2Q8NGK0 314 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 OR51J1Q9H342 316 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 LRRN3Q9H3W5 708 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 ZNF385DQ9H6B1 395 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 EMC3Q9P0I2 261 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 BACE2Q9Y5Z0 518 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 A0A1W2PPK0 400 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 AKR7A2O43488 359 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 HK1P19367 917 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 VSX2P58304 361 aaPredicted RBP13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 RRAS2P62070 204 aaPredicted RBP13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 DSC1Q08554 894 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 STK11Q15831 433 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 ZNF362Q5T0B9 420 aaPredicted RBP13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 TMEM207Q6UWW9 146 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 FRRS1Q6ZNA5 592 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 PDZD9Q8IXQ8 264 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 OR5J2Q8NH18 312 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 CASD1Q96PB1 797 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 SECISBP2Q96T21 854 aaKnown RBP13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 TAC3Q9UHF0 121 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 EXOSC1Q9Y3B2 195 aaKnown RBP13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 TCRBV5S2A0A599 114 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 MROH6A6NGR9 719 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 FAM170BA6NMN3 283 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 RIIAD1A6NNX1 92 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 PTNP21246 168 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 CTSOP43234 321 aaPredicted RBP13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 RPL34P49207 117 aaKnown RBP13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 SGSHP51688 502 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 ZNF311Q5JNZ3 666 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 REEP3Q6NUK4 255 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 CRTC1Q6UUV9 634 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 USP51Q70EK9 711 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 SLC22A12Q96S37 553 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 PIGUQ9H490 435 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 TAS2R10Q9NYW0 307 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 SHROOM3Q8TF72 1996 aa13.92□□□□□ -0.18
RPRD1A-202ENST00000399022 POM121CA8CG34 1229 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 TMEM189-UBE2V1I3L0A0 370 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 NARSO43776 548 aaKnown RBP13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 TLX1P31314 330 aaPredicted RBP13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 TSC22D1Q15714 1073 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 MICAQ29983 383 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 TMEM44Q2T9K0 475 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 SLC36A4Q6YBV0 504 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 NAGSQ8N159 534 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 ADAMTS15Q8TE58 950 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 EFCAB11Q9BUY7 163 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 SLIRPQ9GZT3 109 aaKnown RBP13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 TRIM36Q9NQ86 728 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 POLR2AP24928 1970 aaKnown RBP13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 CACNB4O00305 520 aaPredicted RBP13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 LY75O60449 1722 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 FGF19O95750 216 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 IFNGP01579 166 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 ARSBP15848 533 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 ITGA3P26006 1051 aa13.91□□□□□ -0.18
RPRD1A-202ENST00000399022 CLCNKAP51800 687 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms