RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 TGM3Q08188 693 aa13.23□□□□□ -0.29
RAB1A-201ENST00000398529 TBL3Q12788 808 aaKnown RBP13.23□□□□□ -0.29
RAB1A-201ENST00000398529 PCBP2Q15366 365 aaKnown RBP eCLIP13.23□□□□□ -0.291e-13■■■■□ 25.9
RAB1A-201ENST00000398529 SF3B4Q15427 424 aaKnown RBP eCLIP13.23□□□□□ -0.29
RAB1A-201ENST00000398529 C16orf47Q6ZP98 133 aaPredicted RBP13.23□□□□□ -0.29
RAB1A-201ENST00000398529 LRRC70Q7Z2Q7 622 aa13.23□□□□□ -0.29
RAB1A-201ENST00000398529 LIX1LQ8IVB5 337 aa13.23□□□□□ -0.29
RAB1A-201ENST00000398529 SLC22A9Q8IVM8 553 aa13.23□□□□□ -0.29
RAB1A-201ENST00000398529 SCUBE1Q8IWY4 988 aa13.23□□□□□ -0.29
RAB1A-201ENST00000398529 LIX1Q8N485 282 aa13.23□□□□□ -0.29
RAB1A-201ENST00000398529 ANKRD53Q8N9V6 530 aa13.23□□□□□ -0.29
RAB1A-201ENST00000398529 C7orf57Q8NEG2 295 aa13.23□□□□□ -0.29
RAB1A-201ENST00000398529 OR8D2Q9GZM6 311 aa13.23□□□□□ -0.29
RAB1A-201ENST00000398529 COPS7BQ9H9Q2 264 aaPredicted RBP13.23□□□□□ -0.29
RAB1A-201ENST00000398529 FOXD3Q9UJU5 478 aaPredicted RBP13.23□□□□□ -0.29
RAB1A-201ENST00000398529 ZNF223Q9UK11 482 aaPredicted RBP13.23□□□□□ -0.29
RAB1A-201ENST00000398529 TNPO3Q9Y5L0 923 aaKnown RBP13.23□□□□□ -0.29
RAB1A-201ENST00000398529 LIPGQ9Y5X9 500 aa13.23□□□□□ -0.29
RAB1A-201ENST00000398529 A0A0G2JMM0 328 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 A0A1W2PPB8 328 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 A0A1W2PRS3 328 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 KIR3DP1A8MWS1 328 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 HMGB1P1B2RPK0 211 aaPredicted RBP13.22□□□□□ -0.29
RAB1A-201ENST00000398529 K7EPI3 171 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 TM9SF1O15321 606 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 ERI3O43414 337 aaKnown RBP13.22□□□□□ -0.29
RAB1A-201ENST00000398529 SIX3O95343 332 aaPredicted RBP13.22□□□□□ -0.29
RAB1A-201ENST00000398529 GNAZP19086 355 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 GSTM2P28161 218 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 PPP2R1BP30154 601 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 ADH7P40394 386 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 ASCL1P50553 236 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 NR0B1P51843 470 aaKnown RBP13.22□□□□□ -0.29
RAB1A-201ENST00000398529 SNTB1Q13884 538 aaKnown RBP13.22□□□□□ -0.29
RAB1A-201ENST00000398529 MPP2Q14168 576 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 PCLAFQ15004 111 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 HYAL4Q2M3T9 481 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 RTL6Q6ICC9 239 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 TRIM40Q6P9F5 258 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 CLNKQ7Z7G1 428 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 KIF18BQ86Y91 864 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 KRT78Q8N1N4 520 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 FBXW8Q8N3Y1 598 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 SNX31Q8N9S9 440 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 FAM47BQ8NA70 645 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 OR8K3Q8NH51 312 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 SREK1Q8WXA9 508 aaKnown RBP13.22□□□□□ -0.29
RAB1A-201ENST00000398529 CCDC126Q96EE4 140 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 SPNS1Q9H2V7 528 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 NEUROD4Q9HD90 331 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 OPTCQ9UBM4 332 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 BOKQ9UMX3 212 aaPredicted RBP13.22□□□□□ -0.29
RAB1A-201ENST00000398529 RPH3AQ9Y2J0 694 aaPredicted RBP13.22□□□□□ -0.29
RAB1A-201ENST00000398529 SPACA6W5XKT8 324 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 MPDZO75970 2070 aa13.22□□□□□ -0.29
RAB1A-201ENST00000398529 A0A0G2JN53 185 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 TMEM120BA0PK00 339 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 ANKDD1BA6NHY2 528 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 FAM171A2A8MVW0 826 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 DYRK3O43781 588 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 PRKNO60260 465 aaPredicted RBP13.21□□□□□ -0.29
RAB1A-201ENST00000398529 CTNSO60931 367 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 RPS17P08708 135 aaKnown RBP13.21□□□□□ -0.29
RAB1A-201ENST00000398529 COX7A2P14406 83 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 IMPDH1P20839 514 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 BMP5P22003 454 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 ETV4P43268 484 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 DNASE1L1P49184 302 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 HK2P52789 917 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 SLC18A1P54219 525 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 PRKAA2P54646 552 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 HERVK_113P63132 956 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 KCNJ2P63252 427 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 RNF4P78317 190 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 GTF2H2Q13888 395 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 RUNX2Q13950 521 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 SERTAD2Q14140 314 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 PDK4Q16654 411 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 DEFB113Q30KQ7 82 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 SLC22A10Q63ZE4 541 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 GTF2H2CQ6P1K8 395 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 METTL2BQ6P1Q9 378 aaKnown RBP13.21□□□□□ -0.29
RAB1A-201ENST00000398529 PAMR1Q6UXH9 720 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 TMIGD1Q6UXZ0 262 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 TEX9Q8N6V9 391 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 RNASE6Q93091 150 aaKnown RBP13.21□□□□□ -0.29
RAB1A-201ENST00000398529 C18orf12Q96KH6 178 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 SERINC2Q96SA4 455 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 CNPPD1Q9BV87 410 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 C1QTNF3Q9BXJ4 246 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 ERVK-6Q9BXR3 956 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 CAPS2Q9BXY5 557 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 ALOXE3Q9BYJ1 711 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 DMRT3Q9NQL9 472 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 DLL4Q9NR61 685 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 OXSMQ9NWU1 459 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 TUBA8Q9NY65 449 aaPredicted RBP13.21□□□□□ -0.29
RAB1A-201ENST00000398529 GPRC5BQ9NZH0 403 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 VTI1BQ9UEU0 232 aa13.21□□□□□ -0.29
RAB1A-201ENST00000398529 ANGPTL3Q9Y5C1 460 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms