RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ZNF473Q8WTR7 871 aaKnown RBP8.04□□□□□ -1.12
CAPN3-208ENST00000397204 PPWD1Q96BP3 646 aaKnown RBP8.04□□□□□ -1.12
CAPN3-208ENST00000397204 TSPAN17Q96FV3 270 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 CMTM7Q96FZ5 175 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 CAPZA3Q96KX2 299 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 OSBPL9Q96SU4 736 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 KRT12Q99456 494 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 TIMP4Q99727 224 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 SH3GL2Q99962 352 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 MCMBPQ9BTE3 642 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 MS4A8Q9BY19 250 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 RHOJQ9H4E5 214 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 RPF2Q9H7B2 306 aaKnown RBP8.04□□□□□ -1.12
CAPN3-208ENST00000397204 ZNF703Q9H7S9 590 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-208ENST00000397204 WWOXQ9NZC7 414 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 ADGRE2Q9UHX3 823 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 PTBP2Q9UKA9 531 aaKnown RBP8.04□□□□□ -1.12
CAPN3-208ENST00000397204 CBLCQ9ULV8 474 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 CHCHD2Q9Y6H1 151 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-208ENST00000397204 IKBKGQ9Y6K9 419 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 COL6A5A8TX70 2615 aa8.04□□□□□ -1.12
CAPN3-208ENST00000397204 ATRQ13535 2644 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 FBN3Q75N90 2809 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 LRRC3CA6NJW4 275 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 OR6C76A6NM76 312 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 FAM229AH3BQW9 127 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 RTCAO00442 366 aaKnown RBP8.03□□□□□ -1.12
CAPN3-208ENST00000397204 TP53I11O14683 189 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 FGF17O60258 216 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 TRIM3O75382 744 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-208ENST00000397204 SNX4O95219 450 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 TGFB1P01137 390 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 RAF1P04049 648 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 CCDC166P0CW27 439 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 NID1P14543 1247 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 ALOX15P16050 662 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-208ENST00000397204 CD22P20273 847 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 HOXC12P31275 282 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 GALNSP34059 522 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 MSH2P43246 934 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 HSPA7P48741 367 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 TRPC1P48995 793 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 PLIN5Q00G26 463 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 ID2Q02363 134 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 DUSP8Q13202 625 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 SLAMF1Q13291 335 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 KEAP1Q14145 624 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 NTRK2Q16620 822 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 DEFB113Q30KQ7 82 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 ACSF3Q4G176 576 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-208ENST00000397204 PRAMEF20Q5VT98 475 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 KHDRBS2Q5VWX1 349 aaKnown RBP8.03□□□□□ -1.12
CAPN3-208ENST00000397204 FBXW10Q5XX13 1052 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 NSUN5P2Q63ZY6 315 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 VASNQ6EMK4 673 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 ADNP2Q6IQ32 1131 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 MED27Q6P2C8 311 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 PAMR1Q6UXH9 720 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 GPR180Q86V85 440 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 OR4N5Q8IXE1 308 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 TAGAPQ8N103 731 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 SNX31Q8N9S9 440 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 RELL2Q8NC24 303 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-208ENST00000397204 TNIP2Q8NFZ5 429 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 OR7G3Q8NG95 312 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 TP53INP1Q96A56 240 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 ESAMQ96AP7 390 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 RGMAQ96B86 450 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 SECISBP2Q96T21 854 aaKnown RBP8.03□□□□□ -1.12
CAPN3-208ENST00000397204 PELOQ9BRX2 385 aaKnown RBP8.03□□□□□ -1.12
CAPN3-208ENST00000397204 TMEM79Q9BSE2 394 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 DOHHQ9BU89 302 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 CD244Q9BZW8 370 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 DDX47Q9H0S4 455 aaKnown RBP8.03□□□□□ -1.12
CAPN3-208ENST00000397204 SLC6A15Q9H2J7 730 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 EPB41L4BQ9H329 900 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 DMRT3Q9NQL9 472 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 CD274Q9NZQ7 290 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 CNOT11Q9UKZ1 510 aaKnown RBP8.03□□□□□ -1.12
CAPN3-208ENST00000397204 SNX12Q9UMY4 172 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 CSPG4Q6UVK1 2322 aa8.03□□□□□ -1.12
CAPN3-208ENST00000397204 C15orf38-AP3S2A0A0A6YYH1 394 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 A0A1B0GTL3 188 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 CD8B2A6NJW9 211 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 E7ESA3 106 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 HRKO00198 91 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 CCNT2O60583 730 aaKnown RBP8.02□□□□□ -1.13
CAPN3-208ENST00000397204 TRAPPC6AO75865 159 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 ATE1O95260 518 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 WISP3O95389 354 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-208ENST00000397204 ACSL3O95573 720 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 GPR75O95800 540 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 IL18BPO95998 194 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 PROCP04070 461 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 HPNP05981 417 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 CD1DP15813 335 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 EPORP19235 508 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 CTSSP25774 331 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 PTX3P26022 381 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-208ENST00000397204 GDF1P27539 372 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms