RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 MPIP34949 423 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 PTGER1P34995 402 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 FEN1P39748 380 aaKnown RBP14.1□□□□□ -0.15
CBX3-202ENST00000396386 KCNJ5P48544 419 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 HMGA2P52926 109 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 CRISP3P54108 245 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 PRKAG1P54619 331 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 PUM1Q14671 1186 aaKnown RBP eCLIP14.1□□□□□ -0.156e-15■□□□□ 9.6
CBX3-202ENST00000396386 FBXO42Q6P3S6 717 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 SYT13Q7L8C5 426 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 CAMKVQ8NCB2 501 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 OR9Q2Q8NGE9 314 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 MIPOL1Q8TD10 442 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 MUL1Q969V5 352 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 ZNF354BQ96LW1 612 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 C3orf14Q9HBI5 128 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 RLIMQ9NVW2 624 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 ENOPH1Q9UHY7 261 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 HCN4Q9Y3Q4 1203 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 KLK4Q9Y5K2 254 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 ARHGEF17Q96PE2 2063 aaPredicted RBP14.1□□□□□ -0.15
CBX3-202ENST00000396386 PRAMEF27A3QJZ7 478 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 PTGES3LE9PB15 166 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 H3BMQ9 156 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 FAM20BO75063 409 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 ITIH1P19827 911 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 CD6P30203 668 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 GGT2P36268 569 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 PIGFQ07326 219 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 FZD2Q14332 565 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 LASP1Q14847 261 aaKnown RBP14.1□□□□□ -0.15
CBX3-202ENST00000396386 PROX2Q3B8N5 592 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 COLEC12Q5KU26 742 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 DGLUCYQ7Z3D6 616 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 TAF8Q7Z7C8 310 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 CCDC71Q8IV32 467 aaPredicted RBP14.1□□□□□ -0.15
CBX3-202ENST00000396386 OR9A2Q8NGT5 310 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 SLC37A2Q8TED4 501 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 COG8Q96MW5 612 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 ZNF681Q96N22 645 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 ZFYVE21Q9BQ24 234 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 SPATA5L1Q9BVQ7 753 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 CCDC90BQ9GZT6 254 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 LHPPQ9H008 270 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 UBE2ZQ9H832 354 aaPredicted RBP14.1□□□□□ -0.15
CBX3-202ENST00000396386 LIN28AQ9H9Z2 209 aaKnown RBP14.1□□□□□ -0.15
CBX3-202ENST00000396386 CCNB1IP1Q9NPC3 277 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 WSB2Q9NYS7 404 aaPredicted RBP14.1□□□□□ -0.15
CBX3-202ENST00000396386 PILRAQ9UKJ1 303 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 PCDHGA6Q9Y5G7 932 aa14.1□□□□□ -0.15
CBX3-202ENST00000396386 A0A0J9YY10 115 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 CHURC1-FNTBB4DL54 471 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 B3GALT2O43825 422 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 HMGN2P05204 90 aaKnown RBP14.09□□□□□ -0.15
CBX3-202ENST00000396386 CELA2BP08218 269 aaPredicted RBP14.09□□□□□ -0.15
CBX3-202ENST00000396386 CHRNB1P11230 501 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 CTSEP14091 401 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 CBLP22681 906 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 CPN2P22792 545 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 KRT20P35900 424 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 MC3RP41968 323 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 LIM2P55344 173 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 RELAQ04206 551 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 TDGQ13569 410 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 GTF2IRD2BQ6EKJ0 949 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 LAIR1Q6GTX8 287 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 ABHD13Q7L211 337 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 GTF2IRD2Q86UP8 949 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 TSTD1Q8NFU3 115 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 KLHL6Q8WZ60 621 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 RERGQ96A58 199 aaPredicted RBP14.09□□□□□ -0.15
CBX3-202ENST00000396386 ALPK1Q96QP1 1244 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 NIPSNAP1Q9BPW8 284 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 BCL2L10Q9HD36 194 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 RHCGQ9UBD6 479 aa14.09□□□□□ -0.15
CBX3-202ENST00000396386 TMEM265A0A087WTH1 108 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 A0A1W2PPC4 97 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 A0A1W2PS29 197 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 PCDH17O14917 1159 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 NDUFS2O75306 463 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 SMIM10L1P0DMW3 83 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 TMBIM6P55061 237 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 SLC35A2P78381 396 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 FUT5Q11128 374 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 ZNF542PQ5EBM4 170 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 PRAMEF8Q5VWM4 474 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 PRAMEF7Q5VXH5 474 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 DEF8Q6ZN54 512 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 RNF44Q7L0R7 432 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 PARGQ86W56 976 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 ENTHD1Q8IYW4 607 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 SAMD14Q8IZD0 417 aaPredicted RBP14.08□□□□□ -0.16
CBX3-202ENST00000396386 LRRC25Q8N386 305 aaPredicted RBP14.08□□□□□ -0.16
CBX3-202ENST00000396386 PARP8Q8N3A8 854 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 AQP11Q8NBQ7 271 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 NUP43Q8NFH3 380 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 VANGL1Q8TAA9 524 aaPredicted RBP14.08□□□□□ -0.16
CBX3-202ENST00000396386 BAHD1Q8TBE0 780 aaPredicted RBP14.08□□□□□ -0.16
CBX3-202ENST00000396386 FAM81AQ8TBF8 368 aa14.08□□□□□ -0.16
CBX3-202ENST00000396386 RSC1A1Q92681 617 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms