RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 ELOAQ14241 798 aaKnown RBP14.21□□□□□ -0.13
GPC3-202ENST00000394299 NPTX1Q15818 432 aa14.21□□□□□ -0.13
GPC3-202ENST00000394299 FGD3Q5JSP0 725 aa14.21□□□□□ -0.13
GPC3-202ENST00000394299 TCTN3Q6NUS6 607 aa14.21□□□□□ -0.13
GPC3-202ENST00000394299 DEF8Q6ZN54 512 aa14.21□□□□□ -0.13
GPC3-202ENST00000394299 TAF8Q7Z7C8 310 aa14.21□□□□□ -0.13
GPC3-202ENST00000394299 TSPYL5Q86VY4 417 aaPredicted RBP14.21□□□□□ -0.13
GPC3-202ENST00000394299 PARP8Q8N3A8 854 aa14.21□□□□□ -0.13
GPC3-202ENST00000394299 SLC37A2Q8TED4 501 aa14.21□□□□□ -0.13
GPC3-202ENST00000394299 PRR14Q9BWN1 585 aa14.21□□□□□ -0.13
GPC3-202ENST00000394299 CTPS2Q9NRF8 586 aa14.21□□□□□ -0.13
GPC3-202ENST00000394299 CA14Q9ULX7 337 aa14.21□□□□□ -0.13
GPC3-202ENST00000394299 PRAMEF26H0Y7S4 382 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 M0R3H8 397 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 TPST2O60704 377 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 CTSBP07858 339 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 CHRM4P08173 479 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 ITGA2P17301 1181 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 TYRP1P17643 537 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 PCMT1P22061 227 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 DCKP27707 260 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 LIMS1P48059 325 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 RPS15AP62244 130 aaKnown RBP14.2□□□□□ -0.14
GPC3-202ENST00000394299 SFSWAPQ12872 951 aaKnown RBP14.2□□□□□ -0.14
GPC3-202ENST00000394299 FZD2Q14332 565 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 SEC23BQ15437 767 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 LEXMQ3ZCV2 418 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 KIAA0895LQ68EN5 471 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 GTF2IRD2BQ6EKJ0 949 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 GTF2IRD2Q86UP8 949 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 ERI1Q8IV48 349 aaKnown RBP14.2□□□□□ -0.14
GPC3-202ENST00000394299 SETD9Q8NE22 299 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 GPBAR1Q8TDU6 330 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 KLHL6Q8WZ60 621 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 ZNF681Q96N22 645 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 ALPK1Q96QP1 1244 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 APOL4Q9BPW4 351 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 HRASLS2Q9NWW9 162 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 SEC14L3Q9UDX4 400 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 RNF6Q9Y252 685 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 E9PQ18 207 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 SEC14L2O76054 403 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 IGFBP1P08833 259 aaPredicted RBP14.2□□□□□ -0.14
GPC3-202ENST00000394299 CHRNB1P11230 501 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 JUNBP17275 347 aaPredicted RBP14.2□□□□□ -0.14
GPC3-202ENST00000394299 RHCEP18577 417 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 CSNK2A2P19784 350 aaPredicted RBP14.2□□□□□ -0.14
GPC3-202ENST00000394299 KRT20P35900 424 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 GSTM5P46439 218 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 IDH2P48735 452 aaKnown RBP14.2□□□□□ -0.14
GPC3-202ENST00000394299 LSM11P83369 360 aaKnown RBP eCLIP14.2□□□□□ -0.14
GPC3-202ENST00000394299 KIR2DS3Q14952 304 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 C6orf132Q5T0Z8 1188 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 ZNF540Q8NDQ6 660 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 PHF10Q8WUB8 498 aaKnown RBP14.2□□□□□ -0.14
GPC3-202ENST00000394299 ZNF764Q96H86 408 aaPredicted RBP14.2□□□□□ -0.14
GPC3-202ENST00000394299 HRASLS5Q96KN8 279 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 NMNAT1Q9HAN9 279 aaPredicted RBP14.2□□□□□ -0.14
GPC3-202ENST00000394299 POLMQ9NP87 494 aaPredicted RBP14.2□□□□□ -0.14
GPC3-202ENST00000394299 ANKMY1Q9P2S6 941 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 ENTPD4Q9Y227 616 aa14.2□□□□□ -0.14
GPC3-202ENST00000394299 C10orf142B7Z368 130 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 EPPINO95925 133 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 CCDC159P0C7I6 412 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 MAOBP27338 520 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 BMP8BP34820 402 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 RABIFP47224 123 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 KCNJ5P48544 419 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 TOP3AQ13472 1001 aaPredicted RBP14.19□□□□□ -0.14
GPC3-202ENST00000394299 PIN1Q13526 163 aaPredicted RBP14.19□□□□□ -0.14
GPC3-202ENST00000394299 AQP11Q8NBQ7 271 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 SRFBP1Q8NEF9 429 aaKnown RBP14.19□□□□□ -0.14
GPC3-202ENST00000394299 PROX1Q92786 737 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 SLC22A18Q96BI1 424 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 TM4SF19Q96DZ7 209 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 C10orf90Q96M02 699 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 GABARAPL3Q9BY60 117 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 LMAN1LQ9HAT1 526 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 WSB2Q9NYS7 404 aaPredicted RBP14.19□□□□□ -0.14
GPC3-202ENST00000394299 KCMF1Q9P0J7 381 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 P2RX2Q9UBL9 471 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 BLOC1S6Q9UL45 172 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 SPTY2D1-AS1A0A0U1RR47 76 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 ANKRD33BA6NCL7 494 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 STT3AP46977 705 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 RXRGP48443 463 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 HMGA2P52926 109 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 GP2P55259 537 aaKnown RBP14.19□□□□□ -0.14
GPC3-202ENST00000394299 GABARAPL2P60520 117 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 SLC35A2P78381 396 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 MVKQ03426 396 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 KCNC4Q03721 635 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 RGS1Q08116 209 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 COL13A1Q5TAT6 717 aaPredicted RBP14.19□□□□□ -0.14
GPC3-202ENST00000394299 CCDC81Q6ZN84 652 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 CCDC103Q8IW40 242 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 OR5T3Q8NGG3 340 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 FAM81AQ8TBF8 368 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 GAL3ST3Q96A11 431 aa14.19□□□□□ -0.14
GPC3-202ENST00000394299 ELP4Q96EB1 424 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms