RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SOX30O94993 753 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 TATDN3Q17R31 274 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 CCDC58Q4VC31 144 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 KLBQ86Z14 1044 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 PNLDC1Q8NA58 520 aaKnown RBP18.82■□□□□ 0.6
SHANK1-203ENST00000391813 LCN9Q8WX39 176 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 RAB8BQ92930 207 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 GAL3ST3Q96A11 431 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 ACSL5Q9ULC5 683 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 ALPPL2P10696 532 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 PITPNBP48739 271 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 POU4F2Q12837 409 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 PCBP2Q15366 365 aaKnown RBP eCLIP18.82■□□□□ 0.6
SHANK1-203ENST00000391813 POMZP3Q6PJE2 187 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 KCTD9Q7L273 389 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 WDR53Q7Z5U6 358 aaPredicted RBP18.82■□□□□ 0.6
SHANK1-203ENST00000391813 CD300LFQ8TDQ1 290 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 COQ8BQ96D53 544 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 RPL10LQ96L21 214 aaKnown RBP18.82■□□□□ 0.6
SHANK1-203ENST00000391813 DPH2Q9BQC3 489 aaPredicted RBP18.82■□□□□ 0.6
SHANK1-203ENST00000391813 TAPBPLQ9BX59 468 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 RGCCQ9H4X1 137 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 CD8B2A6NJW9 211 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 CD8BP10966 210 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 RPL10P27635 214 aaKnown RBP18.82■□□□□ 0.6
SHANK1-203ENST00000391813 PRKXP51817 358 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 NUP54Q7Z3B4 507 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 TMEM174Q8WUU8 243 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 OR2AG1Q9H205 316 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 BORCS7-ASMTA0A0B4J1R7 106 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 RBMXL2O75526 392 aaKnown RBP18.82■□□□□ 0.6
SHANK1-203ENST00000391813 IL1AP01583 271 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 ERVPABLB-1P60509 514 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 LASP1Q14847 261 aaKnown RBP18.82■□□□□ 0.6
SHANK1-203ENST00000391813 ZNF280BQ86YH2 543 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 ZSCAN1Q8NBB4 408 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 KCNN1Q92952 543 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 SYT4Q9H2B2 425 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 WDR45Q9Y484 360 aa18.82■□□□□ 0.6
SHANK1-203ENST00000391813 ZNF20P17024 532 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 PYCR1P32322 319 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 CDKN2CP42773 168 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 NRARPQ7Z6K4 114 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 PHOSPHO2Q8TCD6 241 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 CASTOR1Q8WTX7 329 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 NIPAL2Q9H841 368 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 TRAPPC13A5PLN9 417 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 ZNF705EA8MWA4 302 aaPredicted RBP18.81■□□□□ 0.6
SHANK1-203ENST00000391813 TNFRSF10AO00220 468 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 RAB3BP20337 219 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 ARSDP51689 593 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 CLCN7P51798 805 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 PITX1P78337 314 aaPredicted RBP18.81■□□□□ 0.6
SHANK1-203ENST00000391813 NFATC2Q13469 925 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 OXA1LQ15070 435 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 GLT8D1Q68CQ7 371 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 OR52N2Q8NGI0 321 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 GKN1Q9NS71 199 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 VAPAQ9P0L0 249 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 ANKRD12Q6UB98 2062 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 ERI3O43414 337 aaKnown RBP18.81■□□□□ 0.6
SHANK1-203ENST00000391813 HCRTO43612 131 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 OAZ2O95190 189 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 FOSL2P15408 326 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 SERPINA11Q86U17 422 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 LIPT1Q9Y234 373 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 FMO6PO60774 539 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 MPC1LP0DKB6 136 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 ALAS2P22557 587 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 SLC35F1Q5T1Q4 408 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 STEAP3Q658P3 488 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 METTL2BQ6P1Q9 378 aaKnown RBP18.81■□□□□ 0.6
SHANK1-203ENST00000391813 B3GNT8Q7Z7M8 397 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 TCTEX1D2Q8WW35 142 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 CDCA3Q99618 268 aaPredicted RBP18.81■□□□□ 0.6
SHANK1-203ENST00000391813 KLHL9Q9P2J3 617 aa18.81■□□□□ 0.6
SHANK1-203ENST00000391813 ITGB4P16144 1822 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 A0A0G2JN53 185 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 SC5DO75845 299 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 TFP02787 698 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 GCGRP47871 477 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 HTR6P50406 440 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 DNM1P34Q6PK57 102 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 MRPL10Q7Z7H8 261 aaKnown RBP18.8■□□□□ 0.6
SHANK1-203ENST00000391813 GPR135Q8IZ08 494 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 TEX26Q8N6G2 289 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 TCEAL3Q969E4 200 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 NEDD4LQ96PU5 975 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 CACNG4Q9UBN1 327 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 C14orf166Q9Y224 244 aaKnown RBP18.8■□□□□ 0.6
SHANK1-203ENST00000391813 CACNG2Q9Y698 323 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 A0A0G2JMP0 313 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 A8MU76 341 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 SPARCP09486 303 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 ACTA2P62736 377 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 ACTG2P63267 376 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 ITPRIPL2Q3MIP1 535 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 LRRC37A5PQ49AS3 106 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 FOXB2Q5VYV0 432 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 C3P1Q6ZMU1 363 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms