RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 RIOK1Q9BRS2 568 aaKnown RBP0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 CCDC106Q9BWC9 280 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 DCLRE1BQ9H816 532 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 RAB9BQ9NP90 201 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 MMP26Q9NRE1 261 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 C9orf78Q9NZ63 289 aaPredicted RBP0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 PCDHGA1Q9Y5H4 931 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 RFNGQ9Y644 331 aa0.28□□□□□ -2.36
RNU6-239P-201ENST00000390990 MDN1Q9NU22 5596 aa0.28□□□□□ -2.37
RNU6-239P-201ENST00000390990 KMT2BQ9UMN6 2715 aaPredicted RBP0.28□□□□□ -2.37
RNU6-239P-201ENST00000390990 HTATSF1O43719 755 aaKnown RBP0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 C6orf47O95873 294 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 PNPP00491 289 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 MRPL3P09001 348 aaKnown RBP0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 CDX1P47902 265 aaPredicted RBP0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 ALDH3B2P48448 385 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 RGS7P49802 495 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 LIG4P49917 911 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 CCR6P51684 374 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 TIMM10P62072 90 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 BCL2L1Q07817 233 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 SRSF5Q13243 272 aaKnown RBP0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 GIT2Q14161 759 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 FAM174BQ3ZCQ3 159 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 IQCCQ4KMZ1 466 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 SULT1C3Q6IMI6 304 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 ENPP7Q6UWV6 458 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 APOOLQ6UXV4 268 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 TDHQ8IZJ6 230 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 ARRDC1Q8N5I2 433 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 GVQW1Q8N7I0 195 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 NAXEQ8NCW5 288 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 SECISBP2LQ93073 1101 aaKnown RBP0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 TMEM101Q96IK0 257 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 C9orf85Q96MD7 179 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 PPM1MQ96MI6 270 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 TSSK2Q96PF2 358 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 MBOAT4Q96T53 435 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 ULBP2Q9BZM5 246 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 NMNAT2Q9BZQ4 307 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 SYNCQ9H7C4 482 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 PTGES2Q9H7Z7 377 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 PGAP2Q9UHJ9 254 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 PPIEQ9UNP9 301 aaKnown RBP0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 SCML2Q9UQR0 700 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 RNF115Q9Y4L5 304 aa0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 TNKS1BP1Q9C0C2 1729 aaKnown RBP0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 COL27A1Q8IZC6 1860 aaPredicted RBP0.27□□□□□ -2.37
RNU6-239P-201ENST00000390990 C2orf92A0A1B0GVN3 265 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 GLOD5A6NK44 160 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 K7ERI5 159 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 IMPA2O14732 288 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 ACSL4O60488 711 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 CSDE1O75534 798 aaKnown RBP0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 TGDSO95455 350 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 NUDT14O95848 222 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 MMP10P09238 476 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 KRT3P12035 628 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 TCF4P15884 667 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 HTR1EP28566 365 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 PTGDSP41222 190 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 MTIF2P46199 727 aaKnown RBP0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 MFAP3P55082 362 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 DCAF7P61962 342 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 UNC119Q13432 240 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 ELAVL3Q14576 367 aaKnown RBP0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 ABCA11PQ4W5N1 156 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 LBHQ53QV2 105 aaPredicted RBP0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 LYPLAL1Q5VWZ2 237 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 OR52W1Q6IF63 320 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 LINC00336Q6ZUF6 198 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 OAFQ86UD1 273 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 AENQ8WTP8 325 aaKnown RBP0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 TCP11Q8WWU5 503 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 MRPL24Q96A35 216 aaKnown RBP0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 RAB40CQ96S21 281 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 ABHD1Q96SE0 405 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 PRMT1Q99873 361 aaKnown RBP0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 GTPBP2Q9BX10 602 aaKnown RBP0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 TSSK1BQ9BXA7 367 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 FN3KQ9H479 309 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 ZNF665Q9H7R5 613 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 VIPAS39Q9H9C1 493 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 SLC2A6Q9UGQ3 507 aa0.26□□□□□ -2.37
RNU6-239P-201ENST00000390990 HELZ2Q9BYK8 2649 aaKnown RBP0.25□□□□□ -2.37
RNU6-239P-201ENST00000390990 PLEKHG1Q9ULL1 1385 aa0.25□□□□□ -2.37
RNU6-239P-201ENST00000390990 ARPC4-TTLL3A0A0A6YYG9 625 aa0.25□□□□□ -2.37
RNU6-239P-201ENST00000390990 F5H0A9 414 aaPredicted RBP0.25□□□□□ -2.37
RNU6-239P-201ENST00000390990 DOK2O60496 412 aa0.25□□□□□ -2.37
RNU6-239P-201ENST00000390990 BBOX1O75936 387 aa0.25□□□□□ -2.37
RNU6-239P-201ENST00000390990 NOL4O94818 638 aa0.25□□□□□ -2.37
RNU6-239P-201ENST00000390990 LUC7L3O95232 432 aaKnown RBP0.25□□□□□ -2.37
RNU6-239P-201ENST00000390990 PGK1P00558 417 aa0.25□□□□□ -2.37
RNU6-239P-201ENST00000390990 INSP01308 110 aa0.25□□□□□ -2.37
RNU6-239P-201ENST00000390990 WNT2P09544 360 aa0.25□□□□□ -2.37
RNU6-239P-201ENST00000390990 ACAT1P24752 427 aaKnown RBP0.25□□□□□ -2.37
RNU6-239P-201ENST00000390990 NAGLUP54802 743 aa0.25□□□□□ -2.37
RNU6-239P-201ENST00000390990 RPP38P78345 283 aaKnown RBP0.25□□□□□ -2.37
RNU6-239P-201ENST00000390990 ZNF674Q2M3X9 581 aa0.25□□□□□ -2.37
RNU6-239P-201ENST00000390990 EOGTQ5NDL2 527 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms