RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 DSTNP60981 165 aa11.46□□□□□ -0.57
SPTBN1-203ENST00000389980 CHRNB3Q05901 458 aa11.46□□□□□ -0.57
SPTBN1-203ENST00000389980 VAC14Q08AM6 782 aa11.46□□□□□ -0.57
SPTBN1-203ENST00000389980 LSAMPQ13449 338 aa11.46□□□□□ -0.57
SPTBN1-203ENST00000389980 SCARB2Q14108 478 aa11.46□□□□□ -0.57
SPTBN1-203ENST00000389980 NDUFA9Q16795 377 aa11.46□□□□□ -0.57
SPTBN1-203ENST00000389980 ZC3H14Q6PJT7 736 aaKnown RBP11.46□□□□□ -0.57
SPTBN1-203ENST00000389980 VTCN1Q7Z7D3 282 aa11.46□□□□□ -0.57
SPTBN1-203ENST00000389980 LRRC25Q8N386 305 aaPredicted RBP11.46□□□□□ -0.57
SPTBN1-203ENST00000389980 D2HGDHQ8N465 521 aa11.46□□□□□ -0.57
SPTBN1-203ENST00000389980 PAPD5Q8NDF8 572 aaKnown RBP11.46□□□□□ -0.57
SPTBN1-203ENST00000389980 TBC1D20Q96BZ9 403 aa11.46□□□□□ -0.57
SPTBN1-203ENST00000389980 SLC47A1Q96FL8 570 aa11.46□□□□□ -0.57
SPTBN1-203ENST00000389980 SLC41A2Q96JW4 573 aa11.46□□□□□ -0.57
SPTBN1-203ENST00000389980 CHRNA10Q9GZZ6 450 aa11.46□□□□□ -0.57
SPTBN1-203ENST00000389980 EQTNQ9NQ60 294 aa11.46□□□□□ -0.57
SPTBN1-203ENST00000389980 AGPAT4Q9NRZ5 378 aa11.46□□□□□ -0.57
SPTBN1-203ENST00000389980 SPACA6W5XKT8 324 aa11.46□□□□□ -0.57
SPTBN1-203ENST00000389980 PEX1O43933 1283 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 OPN1SWP03999 348 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 LYNP07948 512 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 CPMP14384 443 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 PNLIPP16233 465 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 CKMT2P17540 419 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 NELFEP18615 380 aaKnown RBP11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 ALAS2P22557 587 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 FASP25445 335 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 PCGF2P35227 344 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 CLCN2P51788 898 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 DAB2P98082 770 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 EEF1A2Q05639 463 aaKnown RBP11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 VEZF1Q14119 521 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 MAP7Q14244 749 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 LASP1Q14847 261 aaKnown RBP11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 FAM98BQ52LJ0 330 aaKnown RBP11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 TCTE1Q5JU00 501 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 TMEM71Q6P5X7 295 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 TTLL10Q6ZVT0 673 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 PRSS42Q7Z5A4 293 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 WDR53Q7Z5U6 358 aaPredicted RBP11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 OR7G2Q8NG99 324 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 OR52E4Q8NGH9 312 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 IFI44Q8TCB0 444 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 ATOH1Q92858 354 aaPredicted RBP11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 ELP4Q96EB1 424 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 C16orf58Q96GQ5 468 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 SLC35G5Q96KT7 338 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 CIB1Q99828 191 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 SPATA9Q9BWV2 254 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 NPLQ9BXD5 320 aaPredicted RBP11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 OR51I1Q9H343 314 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 RAD21L1Q9H4I0 556 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 SEMA3GQ9NS98 782 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 DHCR7Q9UBM7 475 aaKnown RBP11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 PCDHGB5Q9Y5G0 923 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 SAC3D1A6NKF1 404 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 HMGN4O00479 90 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 HMGN2P05204 90 aaKnown RBP11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 OR12D1P0DN82 309 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 RAP2AP10114 183 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 CDK6Q00534 326 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 MED21Q13503 144 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 FAM53BQ14153 422 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 GRM7Q14831 915 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 NRF1Q16656 503 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 RPS26P11Q5JNZ5 115 aaPredicted RBP11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 IRAK1BP1Q5VVH5 260 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 OLIG3Q7RTU3 272 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 OR6C4Q8NGE1 309 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 EME1Q96AY2 570 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 ANKRD9Q96BM1 317 aaPredicted RBP11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 PYURFQ96I23 114 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 TPD52L3Q96J77 140 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 UGT2B28Q9BY64 529 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 ASPSCR1Q9BZE9 553 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 LRRN3Q9H3W5 708 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 ZNF768Q9H5H4 540 aaKnown RBP11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 TMEM38AQ9H6F2 299 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 C11orf16Q9NQ32 467 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 CUTCQ9NTM9 273 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 SEMA5BQ9P283 1151 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 TRPC4Q9UBN4 977 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 NDOR1Q9UHB4 597 aa11.45□□□□□ -0.58
SPTBN1-203ENST00000389980 PRAMEF27A3QJZ7 478 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 FITM1A5D6W6 292 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 PCDHGA12O60330 932 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 JRKO75564 520 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 NSA2O95478 260 aaKnown RBP11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 CPNE6O95741 557 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 BCHEP06276 602 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 ARAFP10398 606 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 PORP16435 677 aaPredicted RBP11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 MATN1P21941 496 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 SOX18P35713 384 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 OR1D4P47884 311 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 GK3PQ14409 553 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 PROX2Q3B8N5 592 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 CYP27C1Q4G0S4 372 aa11.44□□□□□ -0.58
SPTBN1-203ENST00000389980 C6orf52Q5T4I8 152 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms