RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 SLC16A5O15375 505 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 GPR37L1O60883 481 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 NCR1O76036 304 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 RPP14O95059 124 aaKnown RBP12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 ACPPP15309 386 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 AOAHP28039 575 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 EVI2BP34910 448 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 RPS5P46782 204 aaKnown RBP12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 GCGRP47871 477 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 FLYWCH1Q4VC44 716 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 UBQLNLQ8IYU4 475 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 BEST4Q8NFU0 473 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 DHRS1Q96LJ7 313 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 LRRN3Q9H3W5 708 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 NDUFAF4Q9P032 175 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 OSGIN1Q9UJX0 560 aa12.52□□□□□ -0.41
TRAPPC9-201ENST00000389328 MT-ND5P03915 603 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 HIST1H2ABP04908 130 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 EDNRAP25101 427 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 PTGER1P34995 402 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 CCDC58Q4VC31 144 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 PRSS36Q5K4E3 855 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 HIST3H2AQ7L7L0 130 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 KIF18BQ86Y91 864 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 SYNPOQ8N3V7 929 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 MFSD4AQ8N468 514 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 ANKK1Q8NFD2 765 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 CEP76Q8TAP6 659 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 SMPDL3AQ92484 453 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 HIST1H2ACQ93077 130 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 CD180Q99467 661 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 TMEM121BQ9BXQ6 578 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 TMEFF2Q9UIK5 374 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 Q9Y3F1 56 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 STON1Q9Y6Q2 735 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 TRBV4-1A0A0J9YWV2 114 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 ANXA2P2A6NMY6 339 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 C1QTNF3-AMACRE9PGA6 284 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 FRS3O43559 492 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 ARL6IP5O75915 188 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 CXCL14O95715 111 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 ANXA2P07355 339 aaKnown RBP12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 LHCGRP22888 699 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 HTR3AP46098 478 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 ARF5P84085 180 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 CDC20Q12834 499 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 POMZP3Q6PJE2 187 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 PROKR2Q8NFJ6 384 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 ZNF461Q8TAF7 563 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 GNPDA2Q8TDQ7 276 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 FAM46AQ96IP4 442 aaKnown RBP12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 TMEM98Q9Y2Y6 226 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 KNL1Q8NG31 2342 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 LRRC72A6NJI9 287 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 FLRT2O43155 660 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 RFPL3O75679 317 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 SERPINA3P01011 423 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 ZNF865P0CJ78 1059 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 SPINT3P49223 89 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 FAPQ12884 760 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 CCDC157Q569K6 752 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 B3GLCTQ6Y288 498 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 KCT2Q8NC54 265 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 OR52P1PQ8NH57 321 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 NEIL2Q969S2 332 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 TAS2R10Q9NYW0 307 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 A3GALT2U3KPV4 340 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 KCNK2O95069 426 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 APOC3P02656 99 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 ACVR2AP27037 513 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 COX20Q5RI15 118 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 PARGQ86W56 976 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 CCDC36Q8IYA8 594 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 ACBD7Q8N6N7 88 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 COX18Q8N8Q8 333 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 WDR48Q8TAF3 677 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 CXorf40BQ96DE9 158 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 SLC6A13Q9NSD5 602 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 ITM2BQ9Y287 266 aa12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 MRPS23Q9Y3D9 190 aaKnown RBP12.51□□□□□ -0.41
TRAPPC9-201ENST00000389328 SDK1Q7Z5N4 2213 aa12.5□□□□□ -0.41
TRAPPC9-201ENST00000389328 ARID1BQ8NFD5 2236 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC9-201ENST00000389328 NRAPQ86VF7 1730 aa12.5□□□□□ -0.41
TRAPPC9-201ENST00000389328 TNFRSF10BO14763 440 aa12.5□□□□□ -0.41
TRAPPC9-201ENST00000389328 GMFGO60234 142 aa12.5□□□□□ -0.41
TRAPPC9-201ENST00000389328 PRNPP04156 253 aa12.5□□□□□ -0.41
TRAPPC9-201ENST00000389328 TGM4P49221 684 aa12.5□□□□□ -0.41
TRAPPC9-201ENST00000389328 CLCNKAP51800 687 aa12.5□□□□□ -0.41
TRAPPC9-201ENST00000389328 XKR4Q5GH76 650 aa12.5□□□□□ -0.41
TRAPPC9-201ENST00000389328 GRHL2Q6ISB3 625 aa12.5□□□□□ -0.41
TRAPPC9-201ENST00000389328 TSEN15Q8WW01 171 aaKnown RBP12.5□□□□□ -0.41
TRAPPC9-201ENST00000389328 KLK6Q92876 244 aa12.5□□□□□ -0.41
TRAPPC9-201ENST00000389328 ECHDC3Q96DC8 303 aa12.5□□□□□ -0.41
TRAPPC9-201ENST00000389328 CDK5RAP2Q96SN8 1893 aa12.5□□□□□ -0.41
TRAPPC9-201ENST00000389328 WASHC1A8K0Z3 465 aa12.5□□□□□ -0.41
TRAPPC9-201ENST00000389328 RNASET2O00584 256 aaKnown RBP12.5□□□□□ -0.41
TRAPPC9-201ENST00000389328 LEFTY1O75610 366 aa12.5□□□□□ -0.41
TRAPPC9-201ENST00000389328 ALX3O95076 343 aa12.5□□□□□ -0.41
TRAPPC9-201ENST00000389328 IL1AP01583 271 aa12.5□□□□□ -0.41
TRAPPC9-201ENST00000389328 CSN2P05814 226 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms