RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 ZNF597Q96LX8 424 aa24.29■■□□□ 1.48
NPHP3-202ENST00000383282 CNOT11Q9UKZ1 510 aaKnown RBP24.29■■□□□ 1.48
NPHP3-202ENST00000383282 HIVEP1P15822 2718 aa24.29■■□□□ 1.48
NPHP3-202ENST00000383282 C2orf92A0A1B0GVN3 265 aa24.28■■□□□ 1.48
NPHP3-202ENST00000383282 A0A1W2PR48 441 aa24.28■■□□□ 1.48
NPHP3-202ENST00000383282 LRRC3CA6NJW4 275 aa24.28■■□□□ 1.48
NPHP3-202ENST00000383282 TP53I11O14683 189 aa24.28■■□□□ 1.48
NPHP3-202ENST00000383282 SLC35E2P0CK97 266 aa24.28■■□□□ 1.48
NPHP3-202ENST00000383282 ART1P52961 327 aa24.28■■□□□ 1.48
NPHP3-202ENST00000383282 HLA-DQA1Q5Y7H0 255 aa24.28■■□□□ 1.48
NPHP3-202ENST00000383282 TMEM198Q66K66 360 aa24.28■■□□□ 1.48
NPHP3-202ENST00000383282 METTL2BQ6P1Q9 378 aaKnown RBP24.28■■□□□ 1.48
NPHP3-202ENST00000383282 ZDHHC24Q6UX98 284 aa24.28■■□□□ 1.48
NPHP3-202ENST00000383282 LIX1LQ8IVB5 337 aa24.28■■□□□ 1.48
NPHP3-202ENST00000383282 DIO2Q92813 273 aa24.28■■□□□ 1.48
NPHP3-202ENST00000383282 ATP6V1E2Q96A05 226 aa24.28■■□□□ 1.48
NPHP3-202ENST00000383282 MRRFQ96E11 262 aaKnown RBP24.28■■□□□ 1.48
NPHP3-202ENST00000383282 SLC6A15Q9H2J7 730 aa24.28■■□□□ 1.48
NPHP3-202ENST00000383282 PROK2Q9HC23 129 aa24.28■■□□□ 1.48
NPHP3-202ENST00000383282 CPSF2Q9P2I0 782 aaKnown RBP24.28■■□□□ 1.48
NPHP3-202ENST00000383282 L3MBTL1Q9Y468 752 aa24.28■■□□□ 1.48
NPHP3-202ENST00000383282 EML6Q6ZMW3 1958 aa24.28■■□□□ 1.48
NPHP3-202ENST00000383282 A0A096LPK6 155 aa24.27■■□□□ 1.48
NPHP3-202ENST00000383282 HSPB2A8KAH6 182 aa24.27■■□□□ 1.48
NPHP3-202ENST00000383282 FOXE1O00358 373 aaPredicted RBP24.27■■□□□ 1.48
NPHP3-202ENST00000383282 KLHL2O95198 593 aa24.27■■□□□ 1.48
NPHP3-202ENST00000383282 AIFM1O95831 613 aa24.27■■□□□ 1.48
NPHP3-202ENST00000383282 GDF1P27539 372 aa24.27■■□□□ 1.48
NPHP3-202ENST00000383282 PEX19P40855 299 aa24.27■■□□□ 1.48
NPHP3-202ENST00000383282 TMED10P49755 219 aaKnown RBP24.27■■□□□ 1.48
NPHP3-202ENST00000383282 GUCY2DQ02846 1103 aa24.27■■□□□ 1.48
NPHP3-202ENST00000383282 HSPB2Q16082 182 aa24.27■■□□□ 1.48
NPHP3-202ENST00000383282 UAP1Q16222 522 aaPredicted RBP24.27■■□□□ 1.48
NPHP3-202ENST00000383282 C6orf163Q5TEZ5 329 aa24.27■■□□□ 1.48
NPHP3-202ENST00000383282 OR52E8Q6IFG1 317 aa24.27■■□□□ 1.48
NPHP3-202ENST00000383282 ARSKQ6UWY0 536 aa24.27■■□□□ 1.48
NPHP3-202ENST00000383282 ULK2Q8IYT8 1036 aa24.27■■□□□ 1.48
NPHP3-202ENST00000383282 L3MBTL4Q8NA19 623 aa24.27■■□□□ 1.48
NPHP3-202ENST00000383282 WDR20Q8TBZ3 569 aa24.27■■□□□ 1.48
NPHP3-202ENST00000383282 SERPINI1Q99574 410 aa24.27■■□□□ 1.48
NPHP3-202ENST00000383282 L2HGDHQ9H9P8 463 aa24.27■■□□□ 1.48
NPHP3-202ENST00000383282 RNF11Q9Y3C5 154 aa24.27■■□□□ 1.48
NPHP3-202ENST00000383282 ANKRD33BA6NCL7 494 aa24.26■■□□□ 1.47
NPHP3-202ENST00000383282 LRRC14BA6NHZ5 514 aa24.26■■□□□ 1.47
NPHP3-202ENST00000383282 WASHC1A8K0Z3 465 aa24.26■■□□□ 1.47
NPHP3-202ENST00000383282 LRATO95237 230 aa24.26■■□□□ 1.47
NPHP3-202ENST00000383282 CLDN9O95484 217 aa24.26■■□□□ 1.47
NPHP3-202ENST00000383282 PIK3R1P27986 724 aa24.26■■□□□ 1.47
NPHP3-202ENST00000383282 TYK2P29597 1187 aa24.26■■□□□ 1.47
NPHP3-202ENST00000383282 TRPC1P48995 793 aa24.26■■□□□ 1.47
NPHP3-202ENST00000383282 RPS6KA2Q15349 733 aa24.26■■□□□ 1.47
NPHP3-202ENST00000383282 GALNT12Q8IXK2 581 aa24.26■■□□□ 1.47
NPHP3-202ENST00000383282 TP53INP1Q96A56 240 aa24.26■■□□□ 1.47
NPHP3-202ENST00000383282 LRRC46Q96FV0 321 aa24.26■■□□□ 1.47
NPHP3-202ENST00000383282 C15orf38-AP3S2A0A0A6YYH1 394 aa24.25■■□□□ 1.47
NPHP3-202ENST00000383282 SEMA3DO95025 777 aa24.25■■□□□ 1.47
NPHP3-202ENST00000383282 SERPINB8P50452 374 aa24.25■■□□□ 1.47
NPHP3-202ENST00000383282 NEK2P51955 445 aa24.25■■□□□ 1.47
NPHP3-202ENST00000383282 DLX5P56178 289 aa24.25■■□□□ 1.47
NPHP3-202ENST00000383282 NRG3P56975 720 aa24.25■■□□□ 1.47
NPHP3-202ENST00000383282 RPP38P78345 283 aaKnown RBP24.25■■□□□ 1.47
NPHP3-202ENST00000383282 TRADDQ15628 312 aa24.25■■□□□ 1.47
NPHP3-202ENST00000383282 CXorf21Q9HAI6 301 aa24.25■■□□□ 1.47
NPHP3-202ENST00000383282 AHRRA9YTQ3 701 aa24.24■■□□□ 1.47
NPHP3-202ENST00000383282 SIX3O95343 332 aaPredicted RBP24.24■■□□□ 1.47
NPHP3-202ENST00000383282 GBAP04062 536 aa24.24■■□□□ 1.47
NPHP3-202ENST00000383282 CLPSP04118 112 aa24.24■■□□□ 1.47
NPHP3-202ENST00000383282 SSTR4P31391 388 aa24.24■■□□□ 1.47
NPHP3-202ENST00000383282 DNAJA1P31689 397 aaKnown RBP24.24■■□□□ 1.47
NPHP3-202ENST00000383282 PHBP35232 272 aa24.24■■□□□ 1.47
NPHP3-202ENST00000383282 DUSP8Q13202 625 aa24.24■■□□□ 1.47
NPHP3-202ENST00000383282 TTC19Q6DKK2 380 aaPredicted RBP24.24■■□□□ 1.47
NPHP3-202ENST00000383282 ZNF441Q8N8Z8 693 aa24.24■■□□□ 1.47
NPHP3-202ENST00000383282 VPS11Q9H270 941 aa24.24■■□□□ 1.47
NPHP3-202ENST00000383282 NOL11Q9H8H0 719 aaKnown RBP24.24■■□□□ 1.47
NPHP3-202ENST00000383282 DNAJB12Q9NXW2 375 aaKnown RBP24.24■■□□□ 1.47
NPHP3-202ENST00000383282 AHSPQ9NZD4 102 aa24.24■■□□□ 1.47
NPHP3-202ENST00000383282 NPFFR2Q9Y5X5 522 aa24.24■■□□□ 1.47
NPHP3-202ENST00000383282 ESYT3A0FGR9 886 aa24.23■■□□□ 1.47
NPHP3-202ENST00000383282 HMX2A2RU54 273 aa24.23■■□□□ 1.47
NPHP3-202ENST00000383282 DVL2O14641 736 aa24.23■■□□□ 1.47
NPHP3-202ENST00000383282 TRIM3O75382 744 aaPredicted RBP24.23■■□□□ 1.47
NPHP3-202ENST00000383282 TRAPPC6AO75865 159 aa24.23■■□□□ 1.47
NPHP3-202ENST00000383282 SNX4O95219 450 aa24.23■■□□□ 1.47
NPHP3-202ENST00000383282 KIR2DL3P43628 341 aa24.23■■□□□ 1.47
NPHP3-202ENST00000383282 MASP1P48740 699 aa24.23■■□□□ 1.47
NPHP3-202ENST00000383282 CCNG1P51959 295 aa24.23■■□□□ 1.47
NPHP3-202ENST00000383282 ZZZ3Q8IYH5 903 aa24.23■■□□□ 1.47
NPHP3-202ENST00000383282 OR4K14Q8NGD5 310 aa24.23■■□□□ 1.47
NPHP3-202ENST00000383282 SECISBP2Q96T21 854 aaKnown RBP24.23■■□□□ 1.47
NPHP3-202ENST00000383282 MED13LQ71F56 2210 aa24.23■■□□□ 1.47
NPHP3-202ENST00000383282 SPG11Q96JI7 2443 aa24.22■■□□□ 1.47
NPHP3-202ENST00000383282 UQCRC1P31930 480 aa24.22■■□□□ 1.47
NPHP3-202ENST00000383282 FBXW4P57775 412 aa24.22■■□□□ 1.47
NPHP3-202ENST00000383282 FUT7Q11130 342 aa24.22■■□□□ 1.47
NPHP3-202ENST00000383282 SF3B4Q15427 424 aaKnown RBP eCLIP24.22■■□□□ 1.47
NPHP3-202ENST00000383282 TECRLQ5HYJ1 363 aa24.22■■□□□ 1.47
NPHP3-202ENST00000383282 C10orf62Q5T681 223 aaPredicted RBP24.22■■□□□ 1.47
NPHP3-202ENST00000383282 TMEM64Q6YI46 380 aa24.22■■□□□ 1.47
NPHP3-202ENST00000383282 PAGE2Q7Z2X7 111 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms