RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 CDCA3Q99618 268 aaPredicted RBP10.25□□□□□ -0.77
NEDD9-201ENST00000379433 GPR174Q9BXC1 333 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 TGIF2Q9GZN2 237 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 BTBD1Q9H0C5 482 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 S1PR5Q9H228 398 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 MVB12BQ9H7P6 319 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 PNPLA3Q9NST1 481 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.25□□□□□ -0.77
NEDD9-201ENST00000379433 FAM227AF5H4B4 570 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 SUV39H1O43463 412 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 BCHEP06276 602 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 MAGP20916 626 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 PTX3P26022 381 aaPredicted RBP10.25□□□□□ -0.77
NEDD9-201ENST00000379433 GRK3P35626 688 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 DAG1Q14118 895 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 COL13A1Q5TAT6 717 aaPredicted RBP10.25□□□□□ -0.77
NEDD9-201ENST00000379433 KHDRBS2Q5VWX1 349 aaKnown RBP10.25□□□□□ -0.77
NEDD9-201ENST00000379433 GPR153Q6NV75 609 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 CEACAM20Q6UY09 585 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 TMEM26Q6ZUK4 368 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 MEX3DQ86XN8 651 aaKnown RBP10.25□□□□□ -0.77
NEDD9-201ENST00000379433 RAB42Q8N4Z0 105 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 ENKURQ8TC29 256 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 C6orf106Q9H6K1 298 aaPredicted RBP10.25□□□□□ -0.77
NEDD9-201ENST00000379433 POLR1BQ9H9Y6 1135 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 TRPV4Q9HBA0 871 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 SLAMF7Q9NQ25 335 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 FAM120CQ9NX05 1096 aaKnown RBP10.25□□□□□ -0.77
NEDD9-201ENST00000379433 WARS2Q9UGM6 360 aaKnown RBP10.25□□□□□ -0.77
NEDD9-201ENST00000379433 ORC6Q9Y5N6 252 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 COMMD3-BMI1R4GMX3 469 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 MDC1Q14676 2089 aaKnown RBP10.25□□□□□ -0.77
NEDD9-201ENST00000379433 TRAV20A0A0B4J274 112 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 CXorf51AA0A1B0GTR3 108 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 H0YJX3 145 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 TMX2-CTNND1H3BSU7 103 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 UGDHO60701 494 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 FMO3P31513 532 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 CAPGP40121 348 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 DCTP40126 519 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 CDH12P55289 794 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 SNRPNP63162 240 aaKnown RBP10.25□□□□□ -0.77
NEDD9-201ENST00000379433 RNF4P78317 190 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 ADRM1Q16186 407 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 ZNF765Q7L2R6 523 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 PATL1Q86TB9 770 aaKnown RBP10.25□□□□□ -0.77
NEDD9-201ENST00000379433 ADHFE1Q8IWW8 467 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 CCDC36Q8IYA8 594 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 ZZZ3Q8IYH5 903 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 ADGRF3Q8IZF5 1079 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 DEPDC4Q8N2C3 294 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 TMEM68Q96MH6 324 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 RBCK1Q9BYM8 510 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 EPHX3Q9H6B9 360 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 ZC4H2Q9NQZ6 224 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 TAAR2Q9P1P5 351 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 CPNE7Q9UBL6 633 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 DNAJB9Q9UBS3 223 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 KLHL3Q9UH77 587 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 SESN1Q9Y6P5 492 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 ALPK2Q86TB3 2170 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 C5orf58C9J3I9 102 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 UPK1AO00322 258 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 PRSS23O95084 383 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 FURINP09958 794 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 CERS1P27544 350 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 RRM2P31350 389 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 RAB28P51157 221 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 SRSF5Q13243 272 aaKnown RBP10.24□□□□□ -0.77
NEDD9-201ENST00000379433 HTR4Q13639 388 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 TEAD4Q15561 434 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 DEFB110Q30KQ9 67 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 PXDC1Q5TGL8 231 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 LRRC56Q8IYG6 542 aaPredicted RBP10.24□□□□□ -0.77
NEDD9-201ENST00000379433 SLC44A3Q8N4M1 653 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 ZNF555Q8NEP9 628 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 RHNO1Q9BSD3 238 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 TEX101Q9BY14 249 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 QRSL1Q9H0R6 528 aaKnown RBP10.24□□□□□ -0.77
NEDD9-201ENST00000379433 SRMSQ9H3Y6 488 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 CXorf36Q9H7Y0 433 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 SYNPO2LQ9H987 977 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 BRF2Q9HAW0 419 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 GPATCH2Q9NW75 528 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 GMEB2Q9UKD1 530 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 TRBV5-3A0A0A0MS03 114 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 IGKV1-8A0A0C4DH67 115 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 TXNL1O43396 289 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 FABP3P05413 133 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 HTR1BP28222 390 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 BCL6P41182 706 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 IDH2P48735 452 aaKnown RBP10.24□□□□□ -0.77
NEDD9-201ENST00000379433 OCA2Q04671 838 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 SCARB2Q14108 478 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 DGCR6Q14129 220 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 UBXN2BQ14CS0 331 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 RPE65Q16518 533 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 LRIF1Q5T3J3 769 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 GPR107Q5VW38 600 aa10.24□□□□□ -0.77
NEDD9-201ENST00000379433 C18orf63Q68DL7 685 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms